Query= MSMg01no348_i07.b1 MSMg01no348_i07.b1 CHROMAT_FILE:
MSMg01no348_i07.b1 PHD_FILE: MSMg01no348_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:50 2005
(581 letters)
>mm_chr14_105983750_105984729
Length = 980
Score = 1048 bits (542), Expect = 0.0
Identities = 569/580 (98%), Gaps = 7/580 (1%)
Strand = Plus / Minus
Query: 5 gaattcatcca---ttggcttccatttataaataaatgtgtgcgtggtccacaaataagg 61
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 gaattcatccagag--ggc-tccatttataaataaatgtgtgcgtggtccacaaataagg 724
Query: 62 ctgaaactcatttctttttatcctaatatgctgctgttgctgtgtcttctatgaacagag 121
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ttgaaactcatttctttttatcctaatatgctgctgttgctgtgtcttctatgaacagag 664
Query: 122 gtcagatctagagacactgtaggcagctgacgcagccttctccaagtgagccaaccatcc 181
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gttagatctagagacactgtaggcagctgacgcagccttctccaagtgagccaaccatcc 604
Query: 182 ccaagctatcattatttcgtttcttttctgtcttagaaacaaaacaaaaaaaccatgcag 241
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 603 ccaagctatcattatttcgtttcttttctgtcttagaaacaaaac-aaaaaaccatgcag 545
Query: 242 tgtaaaggacttggggccacagtgaaggagtttacttttccaccaaggactttagaaata 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tgtaaaggacttggggccacagtgaaggagtttacttttccaccaaggactttagaaata 485
Query: 302 atgtgttgactggttctctgcaaacacattctttgtgccatttttgacttccggggaagg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 atgtgttgactggttctctgcaaacacattctttgtgccatttttgacttccggggaagg 425
Query: 362 atttatgctccacctgacagctctgctttgacgcacttataaacaaaagcaggtgtttat 421
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 424 atttatgctccacctgacagctctgctttgaagcacttataaacaaaagcaggtgtttat 365
Query: 422 aagacactcatcaggggaaaatttgtcttttgaccgtgaacaaggcaggggtggctgtac 481
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aagacactcaccaggggaaaatttgtcttttgaccgtgaacaaggcaggggtggctgtac 305
Query: 482 tacgaagggggttgaccacagatgattgagatgaggctagaggaaggaggaagtgcctga 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tacgaagggggttgaccacagatgattgagatgaggctagaggaaggaggaagtgcctga 245
Query: 542 catcacttccttagtggaagtcttataactaactgttcat 581
||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 catcacttccttagtggaagtcttataactaactgttcat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 980
Length adjustment: 10
Effective length of query: 571
Effective length of database: 970
Effective search space: 553870
Effective search space used: 553870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_i07.g1 MSMg01no348_i07.g1 CHROMAT_FILE:
MSMg01no348_i07.g1 PHD_FILE: MSMg01no348_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:50 2005
(477 letters)
>mm_chr14_105804471_105805347
Length = 877
Score = 864 bits (447), Expect = 0.0
Identities = 469/477 (98%), Gaps = 2/477 (0%)
Strand = Plus / Plus
Query: 1 actccgtagaacaagctggcctcacactccgagatctgcttgcgtctgcctcatgaatgc 60
|||||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||
Sbjct: 201 actccgcagaacaagctggcctcagactccgagatctgtttgcctctgcctcatgaatgc 260
Query: 61 tgggattaaaggcatgtgcctccactgcccagctaatgctaaagttacttcagggaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggattaaaggcatgtgcctccactgcccagctaatgctaaagttacttcagggaattt 320
Query: 121 gactgggaagtcttttgtttgtttgtttgtttgtttttattttgaaagactttctagaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gactgggaagtcttttgtttgtttgtttgtttgtttttattttgaaagactttctagaaa 380
Query: 181 cagtgtcctaggtgaagacagggaattgttcttgagtgaaatataggacaattattacga 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 cagtgtcctaggtgaagacagggaattgttcttgagtgaaatatgggacaattattacga 440
Query: 241 actttttatttatttttcttttactgaaaatagattcttcaggatacacagagatacaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actttttatttatttttcttttactgaaaatagattcttcaggatacacagagatacaaa 500
Query: 301 gtgaaactctatcaaaaaaaaaagaacaaacaaaaaaagaaagacaagaaaataaattat 360
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgaaactctatcaaaaaaaaaa--acaaacaaaaaaagaaagacaagaaaataaattat 558
Query: 361 tttctaatactacattttatcatacaatatatcctgattatagtttccctccgtctactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tttctaatactacattttatcatacaatatatcctgattatagtttccctccgtctactt 618
Query: 421 ctcccagtgcccactgacttcctctcccttgtggatccacttcctttttatctctcc 477
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 619 ctcccagtgcccactgacttcctctcctttgtggatccacttcctttttatctctcc 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
