XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCT
TTTTCTCTCTGTCTCTCTTCCCTTTTCTCCCTCTCTCTCTTCCCCCTCTC
TCTCCATCTCTGCTCCCCTTTCTCTCGTCTATTCTGGGTAATGTAGTTTT
AACTAAAACTGGAGTTGGAAGTCTCCACAAATGAAAAATCCCAGAAGCGA
TGTTTTAAGTAGTGGGCACTGTTGTAAGTAGTTTGGTGAGATCTCAAGCT
AGCCCGCTCCATCCTTCCTGGGATAGGAATCAACTGTATACCTGCCACAT
AGGCCATGCATGTGCCTCTTAGTGTAGCCTGCTCTATTATCAGCTCTTGT
CACATTGACTCACAGTTGCAATGACTGTGGCCATGCAACCTTATTCTACT
TGTTAACCAATTGGAAGAGAATAGAGATATACTGGCAACTTTAATATGGA
AATATTGCTATAGCTCTATTTTCTTTAACCATTTATAAATTTAAAATGAC
AGGAATGTTTTGGGGAAAACCAGAACCAAACACATGTTACGTAAGGCCCT
ATCCTTCCCACAGCTTCAGGCACGCACCAGTCTTTGAAAATATTCTGTGA
ATAANAGGATGTCGTATGTCAAACTATTTCATGTTTTGTGTGATGTTGTT
GATTATAGTCTCACATACAATAACAATGTAGCTGTATTTGTTTCAGCCTT
GCTTTTTACCCTTCCTTCATTACCACGTTTGAACTTAAAAAAAACAATAC
CCC

TTATTCGGGCACNNCTCCTAACGCCCTCCGTTGTGCCTCCTACGCCGCTT
TCCCTCATGCCCCCCTTTCCCCCTGTAACCCTCGTACACTCACCCACCAT
NCTCGCCTTTCTTTGTTACCTCTACAAACAATAAGATACTCANGGCTATC
TCCGCGCGTACCCCCCATATTCATCACCTCGTGCTTTACCAGATTTTTCT
TATTAATCCCCTATTACGCCCTACTACGCATGATAGCTCATATTCCGCCC
TCCCAGCCTTCCATTTATAACCACATTAATTGCCGCACACNCCCTAAGTC
CTAACCCTTCCACCACCTATTTCTCCACTTTCCTCTCCTCTCATATCCCC
CCTTTAANNNGGGGGGGGGCGCGCAACCTNNNNNTTTTTTTCCGGCGCAA
AAAAAGTGGACAAAATAAAAGNTGGGTNGGGGTTTTGAGGGGNCCCCCCT
GGGGGGGNGCGCGGGGNCCCCGGGGNCCACTTTGAGATTCTCGTGTTTCT
CCCGGAAAAACCAATTTTTTTTTAAAAGGGGNTTGGGGAAAACNCNACCC
CTTTAAATTTAAGGGAAAAAAAGGGGTGAATATTTCTNGGGCCGGNNGGA
AAAAAATATTCCCAGAGGCCCCTTTAAAATTGGCGGCCAAGGGGNTTTTT
TTTTTTAAAAAAGGGGAAAAAAAGGGAAAAAAAACACCCTCTTTTTTACA
CCCTTTGTNGGNAAAAAAAAAGGAGAAAACCANCCCCCCCCTTGAAAGAT
TTAAAATAAAAGACGCCCNTTTGGGGTGCCCCCCTNTCCCTTTTTTNGGT
TNNAAAAGGGACNCCTTTAATGTGGTCGGCGCCCCCACAGAGGGGGNGGC
GCGCCCNNCCCCCTTAAAGGGCCCAAAAAAAANAACCCACCCCCAGGGAG
AAAANAGAGGTGTTTTGGGAGANTTTTATTTTCACCTTTTCCCCCAACAA
CAAAAGAGAGGGTTTTTTAAAG

Query= MSMg01no349_b20.b1 MSMg01no349_b20.b1 CHROMAT_FILE:
MSMg01no349_b20.b1 PHD_FILE: MSMg01no349_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:38 2005
         (567 letters)



>mm_chr14_100655331_100656295
          Length = 965

 Score = 1019 bits (527), Expect = 0.0
 Identities = 549/559 (98%), Gaps = 7/559 (1%)
 Strand = Plus / Minus

                                                                       
Query: 9   tctctttttctctctgtctctcttcccttttctccctctctctcttccccctctctctcc 68
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 tctctttttctctctgtctctcttcccttttctccctctctctcttccccctctctctcc 783

                                                                       
Query: 69  atctctgctcccctttctctcgtctattctgggtaatgtagttttaactaaaactggagt 128
           |||||||||||||||||     ||||||||||||||||||||||||||||||||||||||
Sbjct: 782 atctctgctcccctttc-----tctattctgggtaatgtagttttaactaaaactggagt 728

                                                                       
Query: 129 tggaagtctccacaaatgaaaaatcccagaagcgatgttttaagtagtgggcactgttgt 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tggaagtctccacaaatgaaaaatcccagaagcgatgttttaagtagtgggcactgttgt 668

                                                                       
Query: 189 aagtagtttggtgagatctcaagctagcccgctccatccttcctgggataggaatcaact 248
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 667 aagtagtttggtgagatctcaagctag-ccgctccatccttcctgggataggaatcaact 609

                                                                       
Query: 249 gtatacctgccacataggccatgcatgtgcctcttagtgtagcctgctctattatcagct 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gtatacctgccacataggccatgcatgtgcctcttagtgtagcctgctctattatcagct 549

                                                                       
Query: 309 cttgtcacattgactcacagttgcaatgactgtggccatgcaaccttattctacttgtta 368
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 548 cttgtcacattgactcacagttgcaatgactgtggccatgtaaccttattctacttgtta 489

                                                                       
Query: 369 accaattggaagagaatagagatatactggcaactttaatatggaaatattgctatagct 428
           | |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 488 aacaataggaagagaatagagatatactggcaactttaatatggaaatattgcta-agct 430

                                                                       
Query: 429 ctattttctttaaccatttataaatttaaaatgacaggaatgttttggggaaaaccagaa 488
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ctattttctttaaccatttataaatttaaaatgacaggaatgttttggggaaaaccagaa 370

                                                                       
Query: 489 ccaaacacatgttacgtaaggccctatccttcccacagcttcaggcacgcaccagtcttt 548
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ccaaacacatgttacgtaaggccctatccttcccacagcttcaggcacgcaccagtcttt 310

                              
Query: 549 gaaaatattctgtgaataa 567
           |||||||||||||||||||
Sbjct: 309 gaaaatattctgtgaataa 291


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 965
Length adjustment: 10
Effective length of query: 557
Effective length of database: 955
Effective search space:   531935
Effective search space used:   531935
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)