Query= MSMg01no350_d02.b1 MSMg01no350_d02.b1 CHROMAT_FILE:
MSMg01no350_d02.b1 PHD_FILE: MSMg01no350_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:02 2005
(244 letters)
>mm_chr14_37547908_37548554
Length = 647
Score = 443 bits (229), Expect = e-129
Identities = 243/251 (96%), Gaps = 7/251 (2%)
Strand = Plus / Minus
Query: 1 ataacaacttgagttcctgcttctg---aaaaaaaaaaacaagcccattttgttataaat 57
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 367 ataacaacttgagttcctgcttctgaaaaaaaaaaaaaacaagcccattttgttataaat 308
Query: 58 taaaatataagatcagttaccccatccatttcctccatccaacccctttcatgtaccctt 117
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 taaaatataatatcagttaccccatccatttcctccatccaacccctttcatgtaccctt 248
Query: 118 ccttgctacctctcaaatgcataacatccttttctttaagtgttgtgcacactcacgtgc 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ccttgctacctctcaaatgcataacatccttttctttaagtgttgtgcacactcacgtgc 188
Query: 178 acacacatag----acacacacacacacacacacacacacaccctgctcagcctgtttag 233
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 acacacatagacacacacacacacacacacacacacacacaccctgctcagcctgtttag 128
Query: 234 tgttacatgtg 244
|||||||||||
Sbjct: 127 tgttacatgtg 117
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 647
Length adjustment: 9
Effective length of query: 235
Effective length of database: 638
Effective search space: 149930
Effective search space used: 149930
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no350_d02.g1 MSMg01no350_d02.g1 CHROMAT_FILE:
MSMg01no350_d02.g1 PHD_FILE: MSMg01no350_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:03 2005
(486 letters)
>mm_chr14_37345151_37346036
Length = 886
Score = 924 bits (478), Expect = 0.0
Identities = 484/486 (99%)
Strand = Plus / Plus
Query: 1 ttgagaacatagaggctctgatagacataaaggtggaacttgagttttcagggaggaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgagaacatagaggctctgatagacataaaggtggaacttgagttttcagggaggaggt 260
Query: 61 ccaggcactcctctcctctcctcctgccagaacagacttcctggttccaaggacagaatc 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 ccaggcactcctctcctctcctcctgctagaacagacttcctggttccaaggacagaatc 320
Query: 121 tgcttccgtgcaacatgactaccacctgatgggataaggaaactactctgtcttctaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcttccgtgcaacatgactaccacctgatgggataaggaaactactctgtcttctaagg 380
Query: 181 actttaaaatactctgatcccctatgaggaaagtgagcaaatccatccagaactaaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actttaaaatactctgatcccctatgaggaaagtgagcaaatccatccagaactaaagag 440
Query: 241 attagctatatgcatgagcacctcaaagaatagatgtcaccccaacttaaaaaaggtaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attagctatatgcatgagcacctcaaagaatagatgtcaccccaacttaaaaaaggtaga 500
Query: 301 aataggcttaaacatcaaagcaaagtgtagtcgaaggttaagctattgttgttaaactat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aataggcttaaacatcaaagcaaagtgtagtcgaaggttaagctattgttgttaaactat 560
Query: 361 taatatgtccgaggaaattatacatgtgggaagacatttatctctatggaacatagataa 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taatatgtctgaggaaattatacatgtgggaagacatttatctctatggaacatagataa 620
Query: 421 aaaagacaccgtgagccataatgtactgatatgttgcattttatctagcacaaagagaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaagacaccgtgagccataatgtactgatatgttgcattttatctagcacaaagagaga 680
Query: 481 tgggac 486
||||||
Sbjct: 681 tgggac 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
