NNNNNAAATTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAG
AGAGATCCGCGGAATTCCCATTCCTTTCGTCCCAGTGCCACTCAGTTTCA
GTTAAGTACCCTTGTATGGCTTTCTGGAACGGAGATAATCCTCTCAAGAA
AAAGAGACAATGAAAAACCATTACTATTCCTGGTATCTCTATACTGTAGC
AATGACAAGGCTGGATGTTTCTCCTTTTCAGCCACCTGTAGAAAACTGCA
CCAATCGAGGGGTTCTTTACTCAACCACAGAGACACTATCTCTCTGCTGT
TCTCAACACTCTATTAAGGTCTCTTCTGTGTTTCTTGTATTTGCAATTGC
TTTTTTCTTAAAGTCAAGAGCCTTCCTATAAGGATGGTGGATTGAGGAAA
TATTTCAACATTTGCTTGTATACTGTATGTCTTTCCTAAAATTAATAAGT
GTTTTATATCTATGTCACTAATCTATCTTGTGTCTAATAAAATATTTCAC
GACATTTTTTTTATTTACTGTCATTTCATTTTGAGGCTTACCCTTTGGAT
CCATATTTGCCTAATTTAGGAAAGAAGAATGTTTGGTGATTCTGTATAAC
ATTTTCCATATTATTCTGATGTTCTAAGGAAAAAAAAACCCTGTAGCCTT
TTTGTCAAAGCCTTCCAAAGACGTACAATATTTTGAGGGCCTGTTTGATG
CATTTCCTAATATATCTTCTCCGGTGTTTAAGATAG

NTTTTTTTTTCCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGCTGAGGAATA
CTGAATGGCTGAGAAGCACCTGAAAAAAATGTTCAGCATCCTTAATCATC
AGAGAAATGCAAATCAAAAAATTGAGACTCCACCTCACACCAGTCAGAAT
GGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGTGAGGATTTGGAG
AAAGAAGAACACTCCTCCATTGTTGGTGGGCTTTCAAGCTTGTACAACCA
CTCTGGAAATCAGTCTGGCGGTTTTTCCGAAAACTGGACATAGTACTACC
GGAGGATTCCGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAA
CCGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATA
ATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCCCAGCAGAGGAATGGAT
ACAGAAAATGTGGTGCATTTACACAATGGAGTACTAACCAGCTATTTAAG
AGAATGAATTTATGAAATTCCTAGGTAAATGGATGGACCTGGAGGGCATC
CTCCTGAGTGAGGTAAACCAATCCCAAAAGAACTCCCCAATATGTACTCT
CTAATAAGTGGATATTAGCCCCAAAACCTTATAAAACCCAAGTTTAAAAA
AACATTTTGTAAAAACCTTGAAACTTCCAAATAAAGAAGACCAACTTGGT
GG

Query= MSMg01no350_k07.b1 MSMg01no350_k07.b1 CHROMAT_FILE:
MSMg01no350_k07.b1 PHD_FILE: MSMg01no350_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:38 2005
         (504 letters)



>mm_chr14_93115108_93116009
          Length = 902

 Score =  913 bits (472), Expect = 0.0
 Identities = 496/504 (98%), Gaps = 2/504 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgccactcagtttcagttaagtacccttgtatggctttctggaacggagataatcctct 60
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 gtgccactcagtttcagttaagtacccttgtatggctttctggaatggagataatcctct 260

                                                                       
Query: 61  caagaaaaagagacaatgaaaaaccattactattcctggtatctctatactgtagcaatg 120
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 caagaaaaagagacaatgaaaaaccataactattcctggtatctctatactgtagcaatg 320

                                                                       
Query: 121 acaaggctggatgtttctccttttcagccacctgtagaaaactgcaccaatcgaggggtt 180
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaaggctgaatgtttctccttttcagccacctgtagaaaactgcaccaatcgaggggtt 380

                                                                       
Query: 181 ctttactcaaccacagagacactatctctctgctgttctcaacactctattaaggtctct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttactcaaccacagagacactatctctctgctgttctcaacactctattaaggtctct 440

                                                                       
Query: 241 tctgtgtttcttgtatttgcaattgcttttttcttaaagtcaagagccttcctataagga 300
           |||||||||| || |  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgtgtttcctg-acatgcaattgcttttttcttaaagtcaagagccttcctataagga 499

                                                                       
Query: 301 tggtggattgaggaaatatttcaacatttgcttgtatactgtatgtctttcctaaaatta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tggtggattgaggaaatatttcaacatttgcttgtatactgtatgtctttcctaaaatta 559

                                                                       
Query: 361 ataagtgttttatatctatgtcactaatctatcttgtgtctaataaaatatttcacgaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ataagtgttttatatctatgtcactaatctatcttgtgtctaataaaatatttcacgaca 619

                                                                       
Query: 421 ttttttttatttactgtcatttcattttgaggcttaccctttggatccatatttgcctaa 480
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttttttt-atttactgtcatttcattttgaggcttaccctttggatccatatttgcctaa 678

                                   
Query: 481 tttaggaaagaagaatgtttggtg 504
           ||||||||||||||||||||||||
Sbjct: 679 tttaggaaagaagaatgtttggtg 702


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 902
Length adjustment: 10
Effective length of query: 494
Effective length of database: 892
Effective search space:   440648
Effective search space used:   440648
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)