Query= MSMg01no350_k08.b1 MSMg01no350_k08.b1 CHROMAT_FILE:
MSMg01no350_k08.b1 PHD_FILE: MSMg01no350_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:38 2005
(249 letters)
>mm_chr14_75857383_75858031
Length = 649
Score = 464 bits (240), Expect = e-135
Identities = 246/248 (99%)
Strand = Plus / Plus
Query: 1 ggcagagcaagtacatcgtaaccatattaaaaatactcttgaattccattccacggccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggcagagcaagtacatcgtaaccatattaaaaatactcttgaattccattccacggccac 260
Query: 61 tttggagaccttactccaatcccattattttgtcaacttgtattagttacttccctgcgg 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 tttggagaccttactccaatcccattattttgtcaactcgtattagttacttccctgcgg 320
Query: 121 caagaaatattgtttactcctgttttgcattttaataccttttaaaattatgcaatataa 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 caagaaatattgtttactcctgttttacattttaataccttttaaaattatgcaatataa 380
Query: 181 gcagctctaaagtttgaatttacgtgatgctctgactgtgcccaaggacggagaagggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcagctctaaagtttgaatttacgtgatgctctgactgtgcccaaggacggagaagggag 440
Query: 241 ggtgctca 248
||||||||
Sbjct: 441 ggtgctca 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no350_k08.g1 MSMg01no350_k08.g1 CHROMAT_FILE:
MSMg01no350_k08.g1 PHD_FILE: MSMg01no350_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:38 2005
(298 letters)
>mm_chr14_75992722_75993416
Length = 695
Score = 559 bits (289), Expect = e-164
Identities = 294/297 (98%), Gaps = 3/297 (1%)
Strand = Plus / Minus
Query: 1 aagggacaggtcagtgtagcccctgattcacagctgatctgagatcaagtataggtggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 aagggacaggtcagtgtagcccctgattcacagctgatctgagatcaagtataggtggcc 616
Query: 61 ttgacttgagattggtccctcaggtgaaagccatactacagggctgaacccctaacttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ttgacttgagattggtccctcaggtgaaagccatactacagggctgaacccctaacttct 556
Query: 121 gggacctgcacagtaatgccatgtagctagtgtcagagtggaactgaactgaagagcccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gggacctgcacagtaatgccatgtagctagtgtcagagtggaactgaactgaagagcccc 496
Query: 181 acagtagcagccaaaccctccccaggtctgaaaagttactgtttctcccttcccaagtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 acagtagcagccaaaccctccccaggtctgaaaagttactgtttctcccttcccaagtaa 436
Query: 241 tgcagcagttgaagtagatgacagctctggagggaggctggggtgggaggggtaggg 297
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 t---gcagttgaagtagatgacagctctggagggaggctggggtgggaggggtaggg 382
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 695
Length adjustment: 9
Effective length of query: 289
Effective length of database: 686
Effective search space: 198254
Effective search space used: 198254
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
