Query= MSMg01no351_c06.b1 MSMg01no351_c06.b1 CHROMAT_FILE:
MSMg01no351_c06.b1 PHD_FILE: MSMg01no351_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:19 2005
(573 letters)
>mm_chr14_70651067_70652039
Length = 973
Score = 843 bits (436), Expect = 0.0
Identities = 442/444 (99%)
Strand = Plus / Minus
Query: 4 ggaattcttttacaattttgctttattgctggccatgggtggggtgatgtttgcctgtaa 63
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggaattcttttacaattttgttttattgctggccatgggtggggtgatgtttgcctgtaa 385
Query: 64 tcccagtacttaggagatgagttaagatcagattggactatatgaaaccttttaactaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcccagtacttaggagatgagttaagatcagattggactatatgaaaccttttaactaca 325
Query: 124 gtttgttccatcctgttgtattattggcaagagttaaaccttatataaatgtctataata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtttgttccatcctgttgtattattggcaagagttaaaccttatataaatgtctataata 265
Query: 184 tagacattaatttttcatgaaaataaagctctttaatcagcttatttgaccttttggaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tagacattaatttttcatgaaaataaagctctttaatcagcttatttgaccttttggaat 205
Query: 244 gatatattttagtatttaaattctatttaatttaaacttaaaaatagtggtgggcatagt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gatatattttagtatttaaattctatttaatttaaacttaaaaatagtggtgggcatagt 145
Query: 304 ggcacattgccagtaatcccagcattctagaagctgccagttcaaggccagcctgagctt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ggcacattgccagtaatcccagcattctagaagctgccagttcaaggccagcctgagctt 85
Query: 364 catagtaagatcccgtgttgacagttcacagaatgagggtataaacatttgggagagcac 423
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 catagtaagatcccatgttgacagttcacagaatgagggtataaacatttgggagagcac 25
Query: 424 ttgccctgcattctcaaggccttg 447
||||||||||||||||||||||||
Sbjct: 24 ttgccctgcattctcaaggccttg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_c06.g1 MSMg01no351_c06.g1 CHROMAT_FILE:
MSMg01no351_c06.g1 PHD_FILE: MSMg01no351_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:19 2005
(413 letters)
>mm_chr14_70521626_70522436
Length = 811
Score = 752 bits (389), Expect = 0.0
Identities = 407/413 (98%), Gaps = 2/413 (0%)
Strand = Plus / Plus
Query: 1 tggtcctacccgaaagtagctctgtctcctggggggaacaatgtgggacccttgaccatg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 tggtcctacccgaaagtagctctgtctcctggggggaacgatgtgggacccttgaccatg 260
Query: 61 gctcctggaagcaggggaggtggtgtttcctgtgagacagccttgaggagcatcaagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctcctggaagcaggggaggtggtgtttcctgtgagacagccttgaggagcatcaagcag 320
Query: 121 gagcatgtgcccaccccaggatgagactgagtttctcctcccccccgcagcccccccaga 180
||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 321 gagcatgtgcccaccccaggatgagactgagcttctcctcccccccccagcccccccag- 379
Query: 181 ccccccccccgaggaactctacctggctgggagctccaaggcccctctgtacaagtccaa 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cccccccccc-aggaactctacctggctgggagctccaaggcccctctgtacaagtccaa 438
Query: 241 gcagtccccagccaggcagaccaggtgctctctgacatcccacacacagcagcacactca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gcagtccccagccaggcagaccaggtgctctctgacatcccacacacagcagcacactca 498
Query: 301 ggcattgcaaaagagaaggctggaagccaaaggcagcagcacaggggctcaggggctcgg 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 499 ggcattgcaaaagagaaggctggaagacaaaggcagcagcacaggggctcaggggctcgg 558
Query: 361 cccccaccgccccagaagagcaagcacataggtgtgtctccaggagagtttga 413
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cccccaccgccccagaagagcaagcacataggtgtgtctccaggagagtttga 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 811
Length adjustment: 9
Effective length of query: 404
Effective length of database: 802
Effective search space: 324008
Effective search space used: 324008
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
