Query= MSMg01no351_g18.b1 MSMg01no351_g18.b1 CHROMAT_FILE:
MSMg01no351_g18.b1 PHD_FILE: MSMg01no351_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:40 2005
(212 letters)
>mm_chr14_105307264_105307872
Length = 609
Score = 275 bits (142), Expect = 2e-78
Identities = 185/202 (91%), Gaps = 9/202 (4%)
Strand = Plus / Minus
Query: 5 gaattcatatcatatattcttgatctgatagtaataatcacacgaggcgcttcaataata 64
|||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 358 gaattcatatcatagattcttgatctgatagtaataatcacatgaggagcttcaataata 299
Query: 65 caaaaaacgttggattgaaataatttggttaagaagctgaattttggagcatagtggaag 124
| |||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 c-aaaaacattgga-taaaataatttggttaagaagctgaattttggagcatagtggaag 241
Query: 125 catcaaggcgctgtgagcaagtaggtggtggagaaatgagagagagagagagagagacag 184
||||||||||||||||||||||||||||| ||||||||||||||| |||||||| | |
Sbjct: 240 catcaaggcgctgtgagcaagtaggtggt-gagaaatgagagagacagagagaggg---g 185
Query: 185 ggag---gggagggcgaggggg 203
|||| ||||||| |||||||
Sbjct: 184 ggagagggggagggggaggggg 163
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 212
Length of database: 609
Length adjustment: 9
Effective length of query: 203
Effective length of database: 600
Effective search space: 121800
Effective search space used: 121800
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no351_g18.g1 MSMg01no351_g18.g1 CHROMAT_FILE:
MSMg01no351_g18.g1 PHD_FILE: MSMg01no351_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:40 2005
(449 letters)
>mm_chr14_105158424_105159272
Length = 849
Score = 861 bits (445), Expect = 0.0
Identities = 448/449 (99%)
Strand = Plus / Plus
Query: 1 caggacaaggaagtgcgagtgggtgggttagtgagcaggaggagggaggagaggatggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggacaaggaagtgcgagtgggtgggttagtgagcaggaggagggaggagaggatggtg 260
Query: 61 gttcagaggggaaatgaggaaagggataaaatttgaaatgtaaataaagaaaatatctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttcagaggggaaatgaggaaagggataaaatttgaaatgtaaataaagaaaatatctca 320
Query: 121 caaaaagaaaataaatagaaatgtaaataaagaaaatgtctaaaaaattaaatatttgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaaaagaaaataaatagaaatgtaaataaagaaaatgtctaaaaaattaaatatttgaa 380
Query: 181 aacactttttaaatgttaaaatttaaaaaaaaatcaaatctccaatgcctatcaatggag 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 aacactttttaaatgttaaaatttaaaaaaaaatcaaatctccaatacctatcaatggag 440
Query: 241 gaataacttagtgaaatattaatataccaaaacccactgaactgaatgaatttacaatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaataacttagtgaaatattaatataccaaaacccactgaactgaatgaatttacaatga 500
Query: 301 atcgtgttctttaatccagttgatttaattctataagtaattttatttaactttatttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcgtgttctttaatccagttgatttaattctataagtaattttatttaactttatttat 560
Query: 361 tagctggaatttaatcttatatgcagtaaaaatcattttaaatttataaatgaaaattta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagctggaatttaatcttatatgcagtaaaaatcattttaaatttataaatgaaaattta 620
Query: 421 ttaaaaaacaatttgcaaagagtcatgaa 449
|||||||||||||||||||||||||||||
Sbjct: 621 ttaaaaaacaatttgcaaagagtcatgaa 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
