Query= MSMg01no351_l13.b1 MSMg01no351_l13.b1 CHROMAT_FILE:
MSMg01no351_l13.b1 PHD_FILE: MSMg01no351_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:02 2005
(509 letters)
>mm_chr14_40550815_40551724
Length = 910
Score = 725 bits (375), Expect = 0.0
Identities = 388/397 (97%), Gaps = 9/397 (2%)
Strand = Plus / Minus
Query: 1 tatgcatgatcttagcaccaaagactgaaagaaaattgtcaattgacaacacattataaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tatgcatgatcttagcaccaaagactgaaagaaaattgtcaattgacaacacattataaa 338
Query: 61 atttataaaaacactcacagcatttctttctcagtaagcagtcctgcttcagcacatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atttataaaaacactcacagcatttctttctcagtaagcagtcctgcttcagcacatcaa 278
Query: 121 agtgcataaacaggtcagtgatgaaagggataatggaaaactattttgtctccctagca- 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 agtgcataaacaggtcagtgatgaaagggataatggaaaactattttgtctccctagcaa 218
Query: 180 ----aaaag----aaaaaaaaaaaagaattgctgttctgtcattactccctctcacctac 231
||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 aaggaaaagaaaaaaaaaaaaaaaagaattgctgttctgtcattactccctctcacctac 158
Query: 232 caaaaataggaaagattttaaaataattaaaatatagtggctaaagaagcattgaatata 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 caaaaataggaaagattttaaaataattaaaatatagtggctaaagaagcattgaatata 98
Query: 292 tagtctatcttatcactcaggaaaccaagagcattggcttcatcttgaagcttgttagaa 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 tagtctatcttatcactcaggaaaccaagagcattggcttcatcttgaagcttgttagaa 38
Query: 352 cttcagattctcaggccatactcaagatgtaactcaa 388
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 cttcagattctcaggccatactcaagatgtaactcaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 910
Length adjustment: 10
Effective length of query: 499
Effective length of database: 900
Effective search space: 449100
Effective search space used: 449100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_l13.g1 MSMg01no351_l13.g1 CHROMAT_FILE:
MSMg01no351_l13.g1 PHD_FILE: MSMg01no351_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:02 2005
(518 letters)
>mm_chr14_40370303_40371222
Length = 920
Score = 949 bits (491), Expect = 0.0
Identities = 512/525 (97%), Gaps = 12/525 (2%)
Strand = Plus / Plus
Query: 1 aacagtagagatcatattaaaatttgatgactaacagtcaaaaatatttgtatctcaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacagtagagatcatattaaaatttgatgactaacagtcaaaaatatttgtatctcaaat 260
Query: 61 gctaggcaaagacaaaaaagagaaaaaa-tataaggaaagctttagagagattcttaaaa 119
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 gctaggcaaagacaaaaaagagaaaaaaatataaggaaagctttagagagattcttaaaa 320
Query: 120 atgcaatagaaaaatgtactttttattgtccaaagaaattttattaatagttagcagatt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgcaatagaaaaatgtactttttattgtccaaagaaattttattaatagttagcagatt 380
Query: 180 gagcatgcttataaaatataaaaagagcaaaagtagatactcaataaaaagcacaagagt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagcatgcttataaaatataaaaagagcaaaagtagatactcaataaaaagcacaagagt 440
Query: 240 agctgattctatttttca------tatacatggtcattaatcttgaaagaaaaaaatctc 293
||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 441 agctgattcta-----caaaagcatatacatggtcattaatcttgaaagaaaaaaatctc 495
Query: 294 atttataataaaagtgcagctataacaataagattttatttcacctttctaattggcaaa 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 atttataataaaagtgcagctataacaataagattttatttcacctttctaattggcaaa 555
Query: 354 gtcagaagatagtccacactcagtaatgcagtgcacatgtatattgctattaaaagaaca 413
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 556 gtcagaagatagtccacactcagtaatgcagtgcacatgtatattgttattaaaagaaca 615
Query: 414 cagagcaaaatccagtactgacaaaacaataccaagcaattgatgctacttatggtctgg 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 cagagcaaaatccagtactgacaaaacaataccaagcaattgatgctacttatggtctgg 675
Query: 474 ggtttattcatttattcacatactacttattgggttattcctaag 518
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 ggtttattcatttattcacatactacttattgggttattcctaag 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 920
Length adjustment: 10
Effective length of query: 508
Effective length of database: 910
Effective search space: 462280
Effective search space used: 462280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
