Query= MSMg01no353_d04.b1 MSMg01no353_d04.b1 CHROMAT_FILE:
MSMg01no353_d04.b1 PHD_FILE: MSMg01no353_d04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:59 2005
(485 letters)
>mm_chr14_78816806_78817690
Length = 885
Score = 907 bits (469), Expect = 0.0
Identities = 478/481 (99%)
Strand = Plus / Minus
Query: 5 gaattctagcataagtctctctgctccctgactgtagatgggatgtggccagctgccttc 64
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 868 gaattctagcataagtctctctgctccctgattgtagatgggatgtggccagctgccttc 809
Query: 65 agctcctaacatggtgactttcgagtcaggatgaattttgcccttcaagtgtgaaccaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 agctcctaacatggtgactttcgagtcaggatgaattttgcccttcaagtgtgaaccaaa 749
Query: 125 aacaaaccctgacttttttcttttgtatggtattttatcatagcagtgaaaggaattagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 aacaaaccctgacttttttcttttgtatggtattttatcatagcagtgaaaggaattagg 689
Query: 185 acaccaacggtgtctgttatagatagattaactttagagatgaagggagttaatagctca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 688 acaccaacggtgtctgttatagatagattaactttagagatgaagggagttaataactca 629
Query: 245 agattgctttgcttagggagaaaatgggatcagagaggtagtgtgacttcccagatatca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 agattgctttgcttagggagaaaatgggatcagagaggtagtgtgacttcccagatatca 569
Query: 305 ctcagttaacatgatagcccatgttcctactatccatttcttattaagcctgttgattta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ctcagttaacatgatagcccatgttcctactatccatttcttattaagcctgttgattta 509
Query: 365 tcttttccaacttgaaaagaatagcgattattaatggtctagaattatgtcaatagtaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tcttttccaacttgaaaagaatagcgattattaatggtctagaattatgtcaatagtaat 449
Query: 425 agagagctttatctctaggatgaaatcttgtccgtccttgtgagaatgatctctgaatat 484
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 agagagttttatctctaggatgaaatcttgtccgtccttgtgagaatgatctctgaatat 389
Query: 485 g 485
|
Sbjct: 388 g 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_d04.g1 MSMg01no353_d04.g1 CHROMAT_FILE:
MSMg01no353_d04.g1 PHD_FILE: MSMg01no353_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:00 2005
(207 letters)
>mm_chr14_78667964_78668570
Length = 607
Score = 333 bits (172), Expect = 6e-96
Identities = 197/208 (94%), Gaps = 6/208 (2%)
Strand = Plus / Plus
Query: 1 atttcaacattcataggggcatccacctgagaggaactctagcggaaatcggaacccttg 60
|||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 atttcaacatccataggagcatccacctgagaggaactctagcggaaatcagaacccttg 260
Query: 61 caggtatgacatgatggatcagctatgaaaaacaggctaacaaaaggaaatggaggcata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggtatgacatgatggatcagctatgaaaaacaggctaacaaaaggaaatggaggcata 320
Query: 121 tatttcagaagtatgtgcaagatactctgaataagtcatagggtttttgttttgttttgt 180
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 tctttcagaagtatgtgcaagatactgtgaataagtcatagggtttttgttttgttttgt 380
Query: 181 tttgttttgtt--ttg----ttttgttt 202
||||||||||| ||| ||||||||
Sbjct: 381 tttgttttgttgtttggggtttttgttt 408
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 207
Length of database: 607
Length adjustment: 9
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
