Query= MSMg01no353_h05.b1 MSMg01no353_h05.b1 CHROMAT_FILE:
MSMg01no353_h05.b1 PHD_FILE: MSMg01no353_h05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:20 2005
(382 letters)
>mm_chr14_118736455_118737236
Length = 782
Score = 656 bits (339), Expect = 0.0
Identities = 354/359 (98%)
Strand = Plus / Plus
Query: 5 gaattccaggcctcagagagaccctgtctcaaagaaacagtacattgaggaggtgatgga 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggccacagagagaccctgtctcaaagaaacagtacattgaggaggtgatgga 264
Query: 65 gggagggagtaattgaaatacattagaaacatgtaaggaactttcaagaggcaaatttat 124
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 265 gggagggagtaattgaaatacattagaaacatgtaacgaactttcaagaggcaaatttat 324
Query: 125 ttaaaaataatagaaccaaacttagaaggaaagaagtaatagaggtgttgaatctgactg 184
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 325 ttaaaaataatagaaccaaacttagaaggaaagaagtaatagaggtggtgaatctgactg 384
Query: 185 aagtgcactatacacatatatgtagagaaatgttacaataaaataccttactttacacag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagtgcactatacacatatatgtagagaaatgttacaataaaataccttactttacacag 444
Query: 245 ttaacatatgctagtaaaaaaattcagagaggtcccaaaaagttgatagatggcacctga 304
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttaacatatgctaataaaaaaattcagagaggtcccaaaaagttgatagatggcacctga 504
Query: 305 gtaatgatatttgatattgttcactggcatacatacacacacacacacacacacacaca 363
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 505 gtaatgatatttgatattgttcactggcatacacacacacacacacacacacacacaca 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_h05.g1 MSMg01no353_h05.g1 CHROMAT_FILE:
MSMg01no353_h05.g1 PHD_FILE: MSMg01no353_h05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:20 2005
(317 letters)
>mm_chr14_118906228_118906943
Length = 716
Score = 582 bits (301), Expect = e-171
Identities = 313/317 (98%), Gaps = 1/317 (0%)
Strand = Plus / Minus
Query: 1 ttcccgggggggtgggggagggcacatgagcaatgtctccccactcagcacatcccgagg 60
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 324 ttccc-ggggggtgggggagggcacatgaacaatgtctccccactcagcacatcccgagg 266
Query: 61 tcccaagaacaaatcaaagttcagttcaccaatgatccctgtgggaaaacaatgggctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcccaagaacaaatcaaagttcagttcaccaatgatccctgtgggaaaacaatgggctta 206
Query: 121 ttaggttgtttgtttgtttgtttgtttgtttgtttttacagagtgtggatgagggggcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttaggttgtttgtttgtttgtttgtttgtttgtttttacagagtgtggatgagggggcta 146
Query: 181 tagagtgggtgaccctaaagcagccgttctggaacatctgcacctagcataggtgattcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tagagtgggtgaccctaaagcagccgttctggaacatctgcacctagcataggtgattcg 86
Query: 241 ttgatggagcaccttccataagccttccccaccccttatactctagctccaccccgagtc 300
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 85 ttgagggagcaccttccataagccttccccaccccgtatactctagctccaccccgagtc 26
Query: 301 cccaaggccatgttcag 317
|||||||||||||||||
Sbjct: 25 cccaaggccatgttcag 9
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 716
Length adjustment: 9
Effective length of query: 308
Effective length of database: 707
Effective search space: 217756
Effective search space used: 217756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
