Query= MSMg01no353_h22.b1 MSMg01no353_h22.b1 CHROMAT_FILE:
MSMg01no353_h22.b1 PHD_FILE: MSMg01no353_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:23 2005
(479 letters)
>mm_chr14_84583906_84584784
Length = 879
Score = 772 bits (399), Expect = 0.0
Identities = 455/483 (94%), Gaps = 18/483 (3%)
Strand = Plus / Plus
Query: 5 gaattccttaattcagttgaatatgattcattttcattcaacagtaattccctttcgcac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattccttaattcagttgaatatgattcattttcattcaacagtaattccctttcgcac 266
Query: 65 agaagtttttgtcctccaagccttataaagctaaatatatatattcatattatataagta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 267 agaagtttttgtcctccaagccttataaagctaaatatatatattcatattatatgagta 326
Query: 125 attaaatatatatat--catatgagtactaatatacatatagatgtatatatacacacaa 182
||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 327 attaaatatatatatatcatatgagtactaatatacatatatatgcatatatacacacaa 386
Query: 183 acacacatatacatacatatgtatatatatatatatatatatatacatatgtatgtacat 242
|||||||||||||| ||||||||||||||| | || |||||||||||||||
Sbjct: 387 acacacatatacatg----tgtatatatatatatgtgta------catatgtatgtacat 436
Query: 243 gtaca------tacacacacacaaagtgaagtatctaaagtgctcactcaatttctatta 296
||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gtacacacacatacacacacacaaagtgaagtatctaaagtgctcactcaatttctatta 496
Query: 297 gttttcttacatatggaactggccctacagttggatatgatggtgtgcatgtttgatctg 356
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 497 tttttcttacatatggaactggccctacagttggatatgatggtgtgcgtgtttgatctg 556
Query: 357 cacttggggacaggctagttgatttcttttccttggagtgacgggccagctagggctatg 416
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 557 cacttggagacaggctagttgatttcttttccttggagtcacgggccagctagggctatg 616
Query: 417 tagtgaaatcctgtttccaaaccaactaatgaagaagtgtaaatcaacatatcatatttt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tagtgaaatcctgtttccaaaccaactaatgaagaagtgtaaatcaacatatcatatttt 676
Query: 477 cca 479
|||
Sbjct: 677 cca 679
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_h22.g1 MSMg01no353_h22.g1 CHROMAT_FILE:
MSMg01no353_h22.g1 PHD_FILE: MSMg01no353_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:23 2005
(372 letters)
>mm_chr14_84741960_84742731
Length = 772
Score = 600 bits (310), Expect = e-176
Identities = 313/314 (99%)
Strand = Plus / Minus
Query: 59 ttcccctgatttactcagcttgctttcttacagaacccaagacaaccagatatggtacca 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 ttcccctgatttactcagcttgctttcttacagaacccaagacaaccagatatggtacca 713
Query: 119 cccacaacggaccctctcccatgatcactgagaaaatgccttatagctgaatctcatgga 178
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 cccacaacgggccctctcccatgatcactgagaaaatgccttatagctgaatctcatgga 653
Query: 179 ggcatttcctcaaggggaaactcctttttctgtgataactccagctcctgtcaagttgac 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ggcatttcctcaaggggaaactcctttttctgtgataactccagctcctgtcaagttgac 593
Query: 239 acacaacatcagccagtacagaaggataagcaataaaagagaaaaatttagggtaagata 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 acacaacatcagccagtacagaaggataagcaataaaagagaaaaatttagggtaagata 533
Query: 299 tatgctccaaaagtcatatcttattccctatggtttttaaagttgaggtatttattagcc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tatgctccaaaagtcatatcttattccctatggtttttaaagttgaggtatttattagcc 473
Query: 359 cttctccaaatcag 372
||||||||||||||
Sbjct: 472 cttctccaaatcag 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
