NNNNAATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTGACCATCTCTTATGACAGCTCACAACTTTCTGTAACTC
CAATTCCAGGGCATTCAATGTTTGCCTCTGGCTTAGGTGAGCAGTGTACC
TGTGTGGTGCATAGACATGCATGTAGGCAAAAGACTAACACACATAATCT
AAAAATAAACTTTAGAAAAGAAGTGCAGCTACAATGGAAAGACAGAGAAT
GTACCTTAAAATATACAGTTGGGTGGTGGGAACTGAGAGGGGTGAAAAAC
TGGGAAGCAAGTGTTCTCTAGGAGATCTTTTAAAAAGTTCTAGGATATGG
CTTATATGCTATTTATTAACCTGGATGATGAATTAGTCTGACCTCTTTTA
AAATTATATATATAGATAGGTATAGGCATAGCTATAGATATAGTGAATGA
ATAGAAGGTTAAAAACTAAAACAAATATCAGAGCTCCTGTAAATAAAAGA
GACAATTTATTTTCAGCTATAGGGGAATCCAAAGTTTTCCTGTCTGTCTA
GGGGCCTAGAGAGGATAAACCTGCCAAGAAAAGCATTACTCTGCTCCTAT
GTGGTGGTGGGCATGTCTGGGAAAGATAAATCTCACACTTACTGACACTG
ATAACTATATTTGCTGGAAATTCTCTCCATTTCACCCCCCCCCTCCTCCT
TGGTTAATGAAGAAAGGGTTGAAAACCCTTATAAAGCCCCCGTTGTATCN

NNNCCTCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGCTCTGAGCCCCA
TTTTTTAATGGGGTTATTTGATTTTCTGGAGTCTACCTTCTTGAGTTCTT
TATATATATTGGATATTAGTCCCCATCCAATTTGGGATAGGTAAAGATCC
TTTCCCAATCTATTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCT
TTGCAGAAGCTTTGCAATTTTAAGAGGTCCCATTTATCGATTCTTAATCT
TACAGCACAAGCCATTGCTGTTCTATTCAGGAATTTTTCCCCTGTACCAT
ATCTTCGAGGCTTTTCCCTACTTTCTCCTCTATATGTTTCAGATACAACT
TGCCAAACGCATGAAATTCAAGAACGAAGACCAAAGTGTGGACACTTTAC
CCTTTCTTAGAAATGGGAACAAAACACCCATGGGTGGGTATCTTTGGGAT
AGCATTGAAAATGTAAAGGAGGAAAATACCTATTAATATTAAGAACACAA
AGCAGCTTCTCTCCAAAAAAGAAAACTTTATGTTAGAGGAAAAAATTATT
ATCTACCCCCCCAGCCACTATAGTTTTGTGGACGGGATCAGGTATCTTCC
ACACGTCCGGGTTGTCCCTTGTCGGCTTGCCCTTCCGGTTTCCCTTTCCC
TTCCATTGGTTTCCGGTTTCCGTCCTCTTATACCTTTCCCTCTTTCCTTC
ATTCTTCT

Query= MSMg01no353_l14.b1 MSMg01no353_l14.b1 CHROMAT_FILE:
MSMg01no353_l14.b1 PHD_FILE: MSMg01no353_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:40 2005
         (506 letters)



>mm_chr14_39678611_39679516
          Length = 906

 Score =  917 bits (474), Expect = 0.0
 Identities = 495/502 (98%), Gaps = 1/502 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgaccatctcttatgacagctcacaactttctgtaactccaattccagggcatt 64
           |||||||||||| | |||||| |||||||||||||||| ||||||||| |||||||||||
Sbjct: 859 gaattctgacca-cccttatggcagctcacaactttctctaactccaactccagggcatt 801

                                                                       
Query: 65  caatgtttgcctctggcttaggtgagcagtgtacctgtgtggtgcatagacatgcatgta 124
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 caatgtttgcctctggcctaggtgagcagtgtacctgtgtggtgcatagacatgcatgta 741

                                                                       
Query: 125 ggcaaaagactaacacacataatctaaaaataaactttagaaaagaagtgcagctacaat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ggcaaaagactaacacacataatctaaaaataaactttagaaaagaagtgcagctacaat 681

                                                                       
Query: 185 ggaaagacagagaatgtaccttaaaatatacagttgggtggtgggaactgagaggggtga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ggaaagacagagaatgtaccttaaaatatacagttgggtggtgggaactgagaggggtga 621

                                                                       
Query: 245 aaaactgggaagcaagtgttctctaggagatcttttaaaaagttctaggatatggcttat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaaactgggaagcaagtgttctctaggagatcttttaaaaagttctaggatatggcttat 561

                                                                       
Query: 305 atgctatttattaacctggatgatgaattagtctgacctcttttaaaattatatatatag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atgctatttattaacctggatgatgaattagtctgacctcttttaaaattatatatatag 501

                                                                       
Query: 365 ataggtataggcatagctatagatatagtgaatgaatagaaggttaaaaactaaaacaaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ataggtataggcatagctatagatatagtgaatgaatagaaggttaaaaactaaaacaaa 441

                                                                       
Query: 425 tatcagagctcctgtaaataaaagagacaatttattttcagctataggggaatccaaagt 484
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 440 tatcagagctcctgtaaataaaagagacaagttattttcagctataggggaatccaaagt 381

                                 
Query: 485 tttcctgtctgtctaggggcct 506
           ||||||||||||||||||||||
Sbjct: 380 tttcctgtctgtctaggggcct 359


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space:   444416
Effective search space used:   444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)