Query= MSMg01no353_m06.b1 MSMg01no353_m06.b1 CHROMAT_FILE:
MSMg01no353_m06.b1 PHD_FILE: MSMg01no353_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:44 2005
(551 letters)
>mm_chr14_108434501_108435451
Length = 951
Score = 650 bits (336), Expect = 0.0
Identities = 366/376 (97%), Gaps = 2/376 (0%)
Strand = Plus / Minus
Query: 5 gaattcacaatc-ttcgcccatcttgtcactatagaacaaatgcaatagaacatatacat 63
|||||||||||| || |||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 375 gaattcacaatcattggccc-tcttgtcactatagaagaaatgcaatagaacatatacat 317
Query: 64 gtataatatgttgcttccatagattacaatctttaagccttgttcttgtttaatatttta 123
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gtataatatgttgcttccaaagattacaatctttaagccttgttcttgtttaatatttta 257
Query: 124 tattttctcttcattatcattttcctaaacttcactattgttcatactttatatgcagga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tattttctcttcattatcattttcctaaacttcactattgttcatactttatatgcagga 197
Query: 184 attagttgttggtaatacagctgcctttcagtcacttctgctcctgtaagtgaagacctc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 attagttgttggtaatacagctgcctttcagtcacttctgctcctgtaagtgaagacctc 137
Query: 244 actcacactcttgtaagtaaccccaataaaaactaatgatatatcaagttggatttgatg 303
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 136 actcacactcttgtaagtaaccccaataaaaactaatgatttattaagttggatttgatg 77
Query: 304 atatccttaccttgatcttccttaactagagtctgcagatatctgtatgcccccacaaag 363
||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 76 atatccttatgttgatcttccttaactagagtctgcagatatctgtatgcctccacaaag 17
Query: 364 aaaagtgtcaaataag 379
||||||||||||||||
Sbjct: 16 aaaagtgtcaaataag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_m06.g1 MSMg01no353_m06.g1 CHROMAT_FILE:
MSMg01no353_m06.g1 PHD_FILE: MSMg01no353_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:44 2005
(427 letters)
>mm_chr14_108270170_108270996
Length = 827
Score = 787 bits (407), Expect = 0.0
Identities = 422/427 (98%)
Strand = Plus / Plus
Query: 1 ttagtttttgtttcatcttaatgtattttctttgatttttaatattctctcttagaagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagtttttgtttcatcttaatgtattttctttgatttttaatattctctcttagaagac 260
Query: 61 tgtttttttttaaataaaaaaaagaaagagaatagatcctgatgggagtggaggtttaag 120
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtttttttttaaataaaagaaagacagagaatagatcctgatgggagtggaggtttaag 320
Query: 121 gacctgggaagtatagaggaagaataatgtgtaatctggatagattatgtgagaaaaaaa 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 gacctgggaagtatagaggaagaataatgagtaatctggatagattatgtgagaaaaaaa 380
Query: 181 ctattcagtaatgggaaaaatacacatacaagcagtattgtgatttcagatttgaactca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctattcagtaatgggaaaaatacacatacaagcagtattgtgatttcagatttgaactca 440
Query: 241 aaacaattatatcttattactggcttgcagataaaacactatcattttaggaaatgtttt 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaacaaatatatcttattactggcttgcagataaaacactatcattttaggaaatgtttt 500
Query: 301 ctggtgctgatgctattttagggaagaaacaatttcattttaggcaaaatataatcatcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctggtgctgatgctattttagggaagaaacaatttcattttaggcaaaatataatcatcc 560
Query: 361 aattctcattaaagttcactttaatgtattagcaatttggtttatatccaatttttaaaa 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 561 aattctcattaaagttcactttaatgtattagtaatttggtttatatccaatttttaaaa 620
Query: 421 tgaatta 427
|||||||
Sbjct: 621 tgaatta 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
