Query= MSMg01no356_h08.b1 MSMg01no356_h08.b1 CHROMAT_FILE:
MSMg01no356_h08.b1 PHD_FILE: MSMg01no356_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:11 2005
(528 letters)
>mm_chr14_38722498_38723423
Length = 926
Score = 978 bits (506), Expect = 0.0
Identities = 520/526 (98%), Gaps = 4/526 (0%)
Strand = Plus / Plus
Query: 5 gaattctattagatgttactgaacatataagaattgagctgtttaagtctttagtttttt 64
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatta--tgttactgaacatataagaattgagctgtttaagtctttagtttttt 262
Query: 65 taaacaaaaatcaaattagtcccaatgattatgatctctgtattctagtggtgaggctga 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 263 taaacaaaaatcaaattagtcccaatgattatgatctctgtattctagtggtgaggttga 322
Query: 125 ggagagactcagttgtagatccgtaccatgggccagtctttgcatatatttctctgttca 184
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 323 ggagagactcagttgtagatccgtaccatgggccagtctttgcatacatttctctgttca 382
Query: 185 ttgattcctgctctatttttatgatttacccccttgtctttgtgttgggttagatttggt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttgattcctgctctatttttatgatttacccccttgtctttgtgttgggttagatttggt 442
Query: 245 tttcattgcaatagcttcaaaaatggaagcttaggttgatggttttagtgtcctctttgc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tttcattgcaatagcttcaaaaatggaagcttaggttgatggttttagtgtcctctttgc 502
Query: 305 tatcatatatgtttggaactatatcacctctaattactgttttaactgtgacccaaatat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tatcatatatgtttggaactatatcacctctaattactgttttaactgtgacccaaatat 562
Query: 365 cccataagttaccctgttattttgcttaataaatatattttaaaatctcagttgagattt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cccataagttaccctgttattttgcttaataaatatattttaaaatctcagttgagattt 622
Query: 425 cttcttttacccactgatttattaaaatgacctttaagttttgctagtttgtt--gtttt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 623 cttcttttacccactgatttattaaaatgacctttaagttttgctagtttgttatgtttt 682
Query: 483 agaactctttccatcattgatctccagtttaatgccactgtggact 528
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 agaactctttccatcattgatctccagtttaatgccactgtggact 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 926
Length adjustment: 10
Effective length of query: 518
Effective length of database: 916
Effective search space: 474488
Effective search space used: 474488
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_h08.g1 MSMg01no356_h08.g1 CHROMAT_FILE:
MSMg01no356_h08.g1 PHD_FILE: MSMg01no356_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:11 2005
(305 letters)
>mm_chr14_38932401_38933105
Length = 705
Score = 561 bits (290), Expect = e-164
Identities = 302/306 (98%), Gaps = 1/306 (0%)
Strand = Plus / Minus
Query: 1 ttataagcaccgta-caaaaaaaaaatctcagattactagccttataattttgtatcctg 59
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ttataagcaccgtaccaaaaaaaaaatctcagattactagccttataattttgtatcctg 630
Query: 60 acatgaaacatctgcagtcattgtgtgacccaagcttttggtccagtgcagactggatca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 acatgaaacatctgcagtcattgtgtgacccaagcttttggtccagtgcagactggatca 570
Query: 120 gtttcaaccattgcatgctttgttgctgttgttttgtttttgtttttgtttttgtttttg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gtttcaaccattgcatgctttgttgctgttgttttgtttttgtttttgtttttgtttttg 510
Query: 180 ttttgtgtgtaagacctgcgtttgcatggctccaatttgcatggcagggattgctcacat 239
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 509 ttttgtgtgtaagacctgcgtttgcatggctccaatttgcgtggcagggattgctcagat 450
Query: 240 agaagtgacatgtatagtgtctcattctaacttctcagaattatatactagactaatctt 299
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 agaagtgacatgcatagtgtctcattctaacttctcagaattatatactagactaatctt 390
Query: 300 tatgtg 305
||||||
Sbjct: 389 tatgtg 384
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 305
Length of database: 705
Length adjustment: 9
Effective length of query: 296
Effective length of database: 696
Effective search space: 206016
Effective search space used: 206016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
