Query= MSMg01no357_c11.b1 MSMg01no357_c11.b1 CHROMAT_FILE:
MSMg01no357_c11.b1 PHD_FILE: MSMg01no357_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:04 2005
(393 letters)
>mm_chr14_122626849_122627642
Length = 794
Score = 723 bits (374), Expect = 0.0
Identities = 386/390 (98%), Gaps = 1/390 (0%)
Strand = Plus / Plus
Query: 5 gaattcacccttgcctttacactcctgtgttctctcattaacgtctttgtgaacaatctc 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacccttgcgtttacactcctgtgttctctcattaacgtctttgtgaacaatctc 264
Query: 65 tctccgcttttcattcagtctccaccaggcataacccaccgctggccacctaccaacagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tctccgcttttcattcagtctccaccaggcataacccaccgctggccacctaccaacagc 324
Query: 125 tgcactcaacagtccaaatatgtaaatattcctaaaaaattttttctttctaatccccct 184
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 325 tgcactcaacagtccaaatatgtaaatattcctaaaaaaatttttctttctaatccccct 384
Query: 185 ctttctagaagctacataactcctctatgtgactttatttggaatttctcatttaaaaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctttctagaagctacataactcctctatgtgactttatttggaatttctcatttaaaaaa 444
Query: 245 aa-tgatgtttttaattttcctcaccagtgctggcaagagtattaaacaattgttgcttt 303
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaatgatgtttttaattttcctcaccagtgctggcaagagtattaaacaattgttgcttt 504
Query: 304 aaatcactggcgcgactatataaaattaacacatatgtataactgtatattatgttgtgt 363
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 505 aaatcactggcgcgactatataaaattaacacatacgtataactgtatattatgttgtgt 564
Query: 364 taaagcgggttggaaaatcaataccttaag 393
||||||||||||||||||||||||||||||
Sbjct: 565 taaagcgggttggaaaatcaataccttaag 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 794
Length adjustment: 9
Effective length of query: 384
Effective length of database: 785
Effective search space: 301440
Effective search space used: 301440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_c11.g1 MSMg01no357_c11.g1 CHROMAT_FILE:
MSMg01no357_c11.g1 PHD_FILE: MSMg01no357_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:04 2005
(339 letters)
>mm_chr14_122805848_122806587
Length = 740
Score = 634 bits (328), Expect = 0.0
Identities = 337/340 (99%), Gaps = 1/340 (0%)
Strand = Plus / Minus
Query: 1 tttac-catggtccaggagccaacttcggtgtttacgacacacccgggcggcagatcccc 59
||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 540 tttacacatggcccaggagccaacttcggtgtttacgacacacccgggcggcggatcccc 481
Query: 60 tggacgggctatgggccccgcgcaggtgtccggcctgtgcacggggtgcgcgggggccca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tggacgggctatgggccccgcgcaggtgtccggcctgtgcacggggtgcgcgggggccca 421
Query: 120 ggagccccgagaaagacgttattgttacactgtaacgagtctgattaactcgctcctgac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ggagccccgagaaagacgttattgttacactgtaacgagtctgattaactcgctcctgac 361
Query: 180 actttctcttagtttcttcggctcctagcaaccaggcacaaaggcgaaggattgtccccg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 actttctcttagtttcttcggctcctagcaaccaggcacaaaggcgaaggattgtccccg 301
Query: 240 gctccgcggggacacgggcagcctttgatctcgcaccattacagcccggctgcgcgacag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gctccgcggggacacgggcagcctttgatctcgcaccattacagcccggctgcgcgacag 241
Query: 300 gctcacggggtccgggaggcccgcagtcctggccactggg 339
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gctcacggggtccgggaggcccgcagtcctggccactggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 740
Length adjustment: 9
Effective length of query: 330
Effective length of database: 731
Effective search space: 241230
Effective search space used: 241230
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
