Query= MSMg01no358_g24.b1 MSMg01no358_g24.b1 CHROMAT_FILE:
MSMg01no358_g24.b1 PHD_FILE: MSMg01no358_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:42 2005
(452 letters)
>mm_chr14_64873512_64874362
Length = 851
Score = 714 bits (369), Expect = 0.0
Identities = 381/385 (98%), Gaps = 1/385 (0%)
Strand = Plus / Minus
Query: 4 gaattctgtgaattttacctcttactgtaattgttctcaagactctgctactgagtggcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gaattctgtgaattttacctcttactgtaattgttctcaagactctgctactgagtggcc 325
Query: 64 attttgaatgcctcttgaagcctgtctgttcaccctcataatgagtaaagacaggggtgg 123
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 324 attttgaatgcctcttgaagcctgtctgttcaccctcataatgagtaaagacgggggt-g 266
Query: 124 ggggggtatggacatctattttagaaacacacattcttcaaggcttaaaaattggtaata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggggggtatggacatctattttagaaacacacattcttcaaggcttaaaaattggtaata 206
Query: 184 ttggggttatgaagatggctcagtgggtaatggtacctgctgccaagccagacaacccaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttggggttatgaagatggctcagtgggtaatggtacctgctgccaagccagacaacccaa 146
Query: 244 atccgatccctgggattcatatggattcatatggtagacagaaagaaccagtgcctgcac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atccgatccctgggattcatatggattcatatggtagacagaaagaaccagtgcctgcac 86
Query: 304 gtgtgtcttctgagactgctgtgaccagcatcaggcaccccctatttctaatatgtgttc 363
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 85 gtgtgtcttctgagactgctgtgaccagcatcaggtaccccctatttctaatatgtgttc 26
Query: 364 accctagttgttgggcagtcccaga 388
||||| |||||||||||||||||||
Sbjct: 25 accctcgttgttgggcagtcccaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 851
Length adjustment: 10
Effective length of query: 442
Effective length of database: 841
Effective search space: 371722
Effective search space used: 371722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_g24.g1 MSMg01no358_g24.g1 CHROMAT_FILE:
MSMg01no358_g24.g1 PHD_FILE: MSMg01no358_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:42 2005
(174 letters)
>mm_chr14_64721375_64721947
Length = 573
Score = 290 bits (150), Expect = 3e-83
Identities = 162/166 (97%), Gaps = 1/166 (0%)
Strand = Plus / Plus
Query: 1 caaaactcagcttacagcgggtggccatgttactcattctcctcatgacgaatctcacat 60
||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 201 caaaactcagcttccagcgggtggccatgttactcattctccttatgacgaatctcacgt 260
Query: 61 ccatagtgaactgtttaacctttcatgaggcagtcattctgatggacatttccaagactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccatagtgaactgtttaacctttcatgaggcagtcattctgatggacatttccaagactt 320
Query: 121 aaaaaaaaatttacattagtatatttagggtgtgtgtgtgtgtgtg 166
||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaaaaaatt-acattagtatatttagggtgtgtgtgtgtgtgtg 365
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 573
Length adjustment: 8
Effective length of query: 166
Effective length of database: 565
Effective search space: 93790
Effective search space used: 93790
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
