Query= MSMg01no359_c09.b1 MSMg01no359_c09.b1 CHROMAT_FILE:
MSMg01no359_c09.b1 PHD_FILE: MSMg01no359_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:35 2005
(372 letters)
>mm_chr14_33775216_33775987
Length = 772
Score = 650 bits (336), Expect = 0.0
Identities = 360/368 (97%)
Strand = Plus / Plus
Query: 5 gaattctgtgtaccggattcttatctgtccgtcgtttctcgatgccctgtattctacaag 64
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtggagtggattcttatctgtccgtcgtttctcgatgccctgtattctacaag 264
Query: 65 attggaatcacagggcatattcttagctagcagaaaagaaacaggaccacagcagctgtg 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attggaatcacagggaatattcttagctagcagaaaagaaacaggaccacagcagctgtg 324
Query: 125 gaatggagttgggtctacagccaggtccccttccagttcctcagaccacgtgactacttc 184
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 325 gaatggagttgggtctacagcctggtccccttccagttcttcagaccacgtgactacttc 384
Query: 185 tgtttgagccaaacagaagctgggggcccattgtccccgtgctgagagtctgtgagctgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtttgagccaaacagaagctgggggcccattgtccccgtgctgagagtctgtgagctgg 444
Query: 245 aatgagttcatactttaggaatatgaagggggcaggtgatcttgagactaagatgacatt 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gatgagttcatactttaggaatatgaagggggcaggtgatcttgagactaagatgacatt 504
Query: 305 cagtgtcacatctgtgacttgtttcacaaatagccaagggaaaaggattcctgagctggc 364
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 505 cagtgtcacatctgtgacttgtttcacaaatagtcaagggaaaaggattcctgagctggc 564
Query: 365 tcctccca 372
||||||||
Sbjct: 565 tcctccca 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_c09.g1 MSMg01no359_c09.g1 CHROMAT_FILE:
MSMg01no359_c09.g1 PHD_FILE: MSMg01no359_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:35 2005
(297 letters)
>mm_chr14_33953611_33954305
Length = 695
Score = 547 bits (283), Expect = e-160
Identities = 293/297 (98%), Gaps = 2/297 (0%)
Strand = Plus / Minus
Query: 1 tctagcacccacatttctctttcccatgaacccattgtaggtgtggattacaaaacataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tctagcacccacatttctctttcccatgaacccattgtaggtgtggattacaaaacataa 436
Query: 61 aactgtttaccagggaccaaagagaggatgaagcataaggggcttggggagttgaaaggg 120
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aac--tttaccagggaccaaagagaggatgaagcataaggggcttggggagttgaaaggg 378
Query: 121 gaagtttccctgtggtcagattgcagtgccaaggtctgcctttctctgccactgtcctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gaagtttccctgtggtcagattgcagtgccaaggtctgcctttctctgccactgtcctgt 318
Query: 181 ctgtcctgcccccagttgtcctaaaagaccatggcatggtgcccttcatcaagatcttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ctgtcctgcccccagttgtcctaaaagaccatggcatggtgcccttcatcaagatcttcc 258
Query: 241 tggatgatgagtgctaccgggggccctcgctcatcatcttggagcagctctcagtca 297
|||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 257 tggatgatgagtgctaccggggcccctcgctcagcatcttggagcagctctcagtca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 695
Length adjustment: 9
Effective length of query: 288
Effective length of database: 686
Effective search space: 197568
Effective search space used: 197568
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
