Query= MSMg01no359_p21.b1 MSMg01no359_p21.b1 CHROMAT_FILE:
MSMg01no359_p21.b1 PHD_FILE: MSMg01no359_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:37 2005
(392 letters)
>mm_chr14_117042854_117043645
Length = 792
Score = 673 bits (348), Expect = 0.0
Identities = 376/386 (97%), Gaps = 3/386 (0%)
Strand = Plus / Plus
Query: 7 aattcctcagtttctttttttatttattttttatttatttattacgcattttcctcaatt 66
|||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 210 aattcctcagtttctttttt-atttattttttatttatttattacacattttcctcaatt 268
Query: 67 acatttccaatgctatcccaaaagtcccccataccctccccccccacttccctacccacc 126
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 269 acatttccaatgctatcccaaaagtcccccataccc--cccccccacttccctacccacc 326
Query: 127 cattcccattttttggccctggcgttcccctgtactggggcatataaagtttgcgtgtcc 186
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 327 cattcccattttttggccctggcattcctctgtactggggcatataaagtttgcgtgtcc 386
Query: 187 aatgggcctctctttccagtgatggccgactaggccatcttttgatacatatgcagctag 246
|||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||
Sbjct: 387 aatgggcctctctttccagtgatgaccgactaggcaaccttttgatacatatgcagctag 446
Query: 247 agtcaagagctccagggtacgttttttctcctccgttatgaataacttctactgcataca 306
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agtcaagagctccggggtacgttttttctcctccgttatgaataacttctactgcataca 506
Query: 307 ttgtatctgaaatattggtaagttgtcttctcatgtgaacctctccatttcggtaactgg 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ttgtatctgaaatattggtaagttgtcttctcatgtgaacctctccatttcggtaactgg 566
Query: 367 ggttttataagagaaaaaagaaatat 392
||||||||||||||||||||||||||
Sbjct: 567 ggttttataagagaaaaaagaaatat 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_p21.g1 MSMg01no359_p21.g1 CHROMAT_FILE:
MSMg01no359_p21.g1 PHD_FILE: MSMg01no359_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:37 2005
(304 letters)
>mm_chr14_117249765_117250468
Length = 704
Score = 536 bits (277), Expect = e-157
Identities = 298/305 (97%), Gaps = 1/305 (0%)
Strand = Plus / Minus
Query: 1 tatagcagtagaaccgaagaacgctgtaggagaataaggaacaaagccaaatacctctgt 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tatagcagtagaactgaagaacgctgtaggagaataaggaacaaagccaaatacctctgt 283
Query: 61 gaagaaaagagtatatgtctgcagaggaaattggtcacaaaagcacacttttctcggtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 282 gaagaaaagagtatatgtctgcagaggaaattggtcacaaaagcacacttttctcagtga 223
Query: 121 agactggtgtcatgctggcctagccaaggaactatcaggaactcagaggccaagaataga 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 222 agactggtgtcatgctggcctagccaaggaactatgaggaactcagaggccaagaataga 163
Query: 181 tctttcccttgagctgtgtgagggagtctggccctgttaccaccttgatctcaaactgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 tctttcccttgagctgtgtgagggagtctggccctgttaccaccttgatctcaaactgca 103
Query: 241 gtcttc-gaacatttagacaatacatttttcttctttttgaaagctatctggtttgtggt 299
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 gtcttctgaacagggagacaatacatttttcttctttttgaaagctatctggtttgtggt 43
Query: 300 ccatt 304
|||||
Sbjct: 42 ccatt 38
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 704
Length adjustment: 9
Effective length of query: 295
Effective length of database: 695
Effective search space: 205025
Effective search space used: 205025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
