Query= MSMg01no360_m07.b1 MSMg01no360_m07.b1 CHROMAT_FILE:
MSMg01no360_m07.b1 PHD_FILE: MSMg01no360_m07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:36 2005
(178 letters)
>mm_chr14_121575817_121576394
Length = 578
Score = 298 bits (154), Expect = 1e-85
Identities = 172/178 (96%)
Strand = Plus / Plus
Query: 1 ggtagatcccttagaaatcttatcctttagctgaagggtaggctgaagcacttcccattt 60
|||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 201 ggtagatcccttagtaatcttatcatttagctgaagagtaggctgaagcacttcccattt 260
Query: 61 cgccatttctttgaaaggcactgttgatcacttaagtcctgaggagagacgccaatactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgccatttctttgaaaggcactgttgatcacttaagtcctgaggagagacgccaatactg 320
Query: 121 ttgacttgcactagtatttccgacttctgtgttcagtgaccttagaaagctactgttg 178
| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 tcgtcttgcactagtatttccgacttctgtgttcaatgaccttagaaagctactgttg 378
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 178
Length of database: 578
Length adjustment: 8
Effective length of query: 170
Effective length of database: 570
Effective search space: 96900
Effective search space used: 96900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no360_m07.g1 MSMg01no360_m07.g1 CHROMAT_FILE:
MSMg01no360_m07.g1 PHD_FILE: MSMg01no360_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:36 2005
(390 letters)
>mm_chr14_121758166_121758955
Length = 790
Score = 721 bits (373), Expect = 0.0
Identities = 383/387 (98%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 1 tcctaacctggaggtgcagagtcgccttccacagacacctgagcctggtctaaatttcct 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 784 tcctaacctggaggtgcagagtcgccttccacagacacctgagcccggtctaaatttc-- 727
Query: 61 ctcttttcaggacagggtttctctagccctagttctcctggaattcactcttagactagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ctcttttcaggacagggtttctctagccctagttctcctggaattcactcttagactagg 667
Query: 121 ctggccttgaactcacagagctatacctgcctctgcctccagagtgctggggttaaaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ctggccttgaactcacagagctatacctgcctctgcctccagagtgctggggttaaaggt 607
Query: 181 gtgtgccagcaccacccagatttgaccaggagagtcttactggggttgttaagcctctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gtgtgccagcaccacccagatttgaccaggagagtcttactggggttgttaagcctctct 547
Query: 241 gcttgttctgggtcccctctgatttttctcataggccccttcccagtcgagtctttggat 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gcttggtctgggtcccctctgatttttctcataggccccttcccagtcgagtctttggat 487
Query: 301 aagctagctctctccagagttagatggtctgcctcctgcccctctcatctttaagtcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aagctagctctctccagagttagatggtctgcctcctgcccctctcatctttaagtcttt 427
Query: 361 catagacttcccaaggccctgaatttg 387
|||||||||||||||||||||||||||
Sbjct: 426 catagacttcccaaggccctgaatttg 400
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
