Query= MSMg01no362_g07.b1 MSMg01no362_g07.b1 CHROMAT_FILE:
MSMg01no362_g07.b1 PHD_FILE: MSMg01no362_g07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:44 2005
(467 letters)
>mm_chr14_90864069_90864935
Length = 867
Score = 857 bits (443), Expect = 0.0
Identities = 458/465 (98%), Gaps = 6/465 (1%)
Strand = Plus / Minus
Query: 5 gaattcttttca--tttccctttctatctatctatctatctatctatctcatctatctac 62
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 gaattcttttcatcttt--ctttctatctatctatctatctatctatctcatctatctac 739
Query: 63 ctatctacctatctatctgtatctatatctatatctatctatatcatatatatatatata 122
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 738 ctatctacctatctatctgtatctatatctatatctatctatatc--atatatatatata 681
Query: 123 tatatatatatatcaacttaggaaaaacaaaggcaaaagaatgtgatattgtggaggaaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tatatatatatatcaacttaggaaaaacaaaggcaaaagaatgtgatattgtggaggaaa 621
Query: 183 agtcttgttaaggactctactcagtttcaagtagaagcttacatttcactgtgatatagt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agtcttgttaaggactctactcagtttcaagtagaagcttacatttcactgtgatatagt 561
Query: 243 cttccaagctaagtagaaataaactgtctacagatatgctggtctgcatacaaggtgcta 302
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 560 cttccaagctaagtagaaataaactgtctacagagatgctggtctgcatacaaggtgcta 501
Query: 303 tttgcaggaatctgtggccaaagatttgcaactctcaaaggggggggcagagaagaagga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttgcaggaatctgtggccaaagatttgcaactctcaaaggggggggcagagaagaagga 441
Query: 363 acagctatgtaagagagggtggggaggggacagagacaagactccaaggtgtagaggaag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acagctatgtaagagagggtggggaggggacagagacaagactccaaggtgtagaggaag 381
Query: 423 tgggaacaaggctgccctggagtcagtagcaggagaggacacagc 467
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgggaacaaggctgccctggagtcagtagcaggagaggacacagc 336
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_g07.g1 MSMg01no362_g07.g1 CHROMAT_FILE:
MSMg01no362_g07.g1 PHD_FILE: MSMg01no362_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:44 2005
(472 letters)
>mm_chr14_90710394_90711265
Length = 872
Score = 913 bits (472), Expect = 0.0
Identities = 472/472 (100%)
Strand = Plus / Plus
Query: 1 acttggcttctaaatgaggcaatcctctccctgaatgtatttattaccaatgtatttcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttggcttctaaatgaggcaatcctctccctgaatgtatttattaccaatgtatttcaa 260
Query: 61 ttgtgagagatggtgtaaaaagttggaactcacagcatctggacagaaatatgaagacgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtgagagatggtgtaaaaagttggaactcacagcatctggacagaaatatgaagacgg 320
Query: 121 gttgaccttgcaggtgatgagttatttgcaatgcttcagtagtattccatatgcagtagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttgaccttgcaggtgatgagttatttgcaatgcttcagtagtattccatatgcagtagg 380
Query: 181 taaacagcgtgatattgccaacagggggagctaaagacagaagacaaatgaagcctttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaacagcgtgatattgccaacagggggagctaaagacagaagacaaatgaagcctttgt 440
Query: 241 gcataggaatgtaatttagctgaactgacaatatattataccttaatagcacctcagagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcataggaatgtaatttagctgaactgacaatatattataccttaatagcacctcagagt 500
Query: 301 gagtttaattgatgacctaacttagatattctcttagagtatctttgcactggattggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagtttaattgatgacctaacttagatattctcttagagtatctttgcactggattggat 560
Query: 361 gcaagctgggtgcttaagtgtgcttccctgctgctaatagtgtgactgccatctggagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcaagctgggtgcttaagtgtgcttccctgctgctaatagtgtgactgccatctggagaa 620
Query: 421 gataccagctaatatgttcccggaatgtgtttctccattgttactgcttaaa 472
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gataccagctaatatgttcccggaatgtgtttctccattgttactgcttaaa 672
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
