Query= MSMg01no363_g12.b1 MSMg01no363_g12.b1 CHROMAT_FILE:
MSMg01no363_g12.b1 PHD_FILE: MSMg01no363_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:06 2005
(603 letters)
>mm_chr14_20637916_20638921
Length = 1006
Score = 1108 bits (573), Expect = 0.0
Identities = 594/602 (98%), Gaps = 3/602 (0%)
Strand = Plus / Minus
Query: 5 gaattccttaacata-caacgttacttggttaatttgccagcttccactgcaactaagcc 63
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 gaattccttaacaaaggaacgttacttggttaatttgccagcttccactgcaactaagcc 747
Query: 64 attgacactgctgccaacatcagagcccttggggtttggagtattggttgcagcagctat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 attgacactgctgccaacatcagagcccttggggtttggagtattggttgcagcagctat 687
Query: 124 ttcacaggagatagaaacatactggtgtgtctagtgccagtgcacattaagacagtgtag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ttcacaggagatagaaacatactggtgtgtctagtgccagtgcacattaagacagtgtag 627
Query: 184 gccaatatgtatgtgtagtgtttaagcttcctcagctatggacagtcttctgttatctga 243
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 626 gccaatatgtatgtgtagtgtttaatcttcctcagctatggacagtcttctgttatctga 567
Query: 244 agcgtttgaagttggtgccagtggaagaggtgcctcattgcactgcttcctttcatcaga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 agcgtttgaagttggtgccagtggaagaggtgcctcattgcactgcttcctttcatcaga 507
Query: 304 cacctcagcttcaggctgagcaccccgcttcacttccatccttgggtttgtgactttcct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cacctcagcttcaggctgagcaccccgcttcacttccatccttgggtttgtgactttcct 447
Query: 364 tcacggtgcctgtcactttcaggtcctagatgtgtgctcttgaaacctgtctgatatgtg 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tcacggtgcctgtcactttcaggtcctagatgtgtgctcttgaaacctgtctgatatgta 387
Query: 424 tagcttctctgccccacccatcccgttaccattagtctttgtctgagtctgctgtgtcac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tagcttctctgccccacccatcccgttaccattagtctttgtctgagtctgctgtgtcac 327
Query: 484 c--tgtttctgctgctgccgccctgtangcttcagctcttgtcaccttcttctagtatag 541
| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 326 ctgtgtttctgctgctgccgccctgtaggcttcagctcttgtcaccttcttctagtatag 267
Query: 542 ggcggtgccaccccctgttctcagctgcatgtcctctggctaactttctgaactatattt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ggcggtgccaccccctgttctcagctgcatgtcctctggctaactttctgaactatattt 207
Query: 602 ta 603
||
Sbjct: 206 ta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1006
Length adjustment: 10
Effective length of query: 593
Effective length of database: 996
Effective search space: 590628
Effective search space used: 590628
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_g12.g1 MSMg01no363_g12.g1 CHROMAT_FILE:
MSMg01no363_g12.g1 PHD_FILE: MSMg01no363_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:06 2005
(298 letters)
>mm_chr5_63179181_63179878
Length = 698
Score = 561 bits (290), Expect = e-164
Identities = 296/298 (99%)
Strand = Plus / Plus
Query: 1 aatttcactgaaatgtcccttttctaataagttatttgaaaccacaactacaattttcaa 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 aatttcactgaaatgtcccttttctaataagttatttgaaaccacaagtacaattttcaa 260
Query: 61 ggaatacaggctttaaatttgtgtgtagtttataagaaactagcaatactccttaatata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaatacaggctttaaatttgtgtgtagtttataagaaactagcaatactccttaatata 320
Query: 121 aaaagggaaatattttttcttttcaatatattataacacctggagaaaaattataaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaagggaaatattttttcttttcaatatattataacacctggagaaaaattataaaatg 380
Query: 181 aattttgatttatgggtcacctaacattttaaacattttaaaagaatgtctatccttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aattttgatttatgggtcacctaacattttaaacattttaaaagaatgtctatccttcaa 440
Query: 241 atgcagacattttatttttggatttagagaacatctatgcatgtatagagaagaatct 298
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 atgcagacattttatttttggatttagagaacatctatgcatgtataaagaagaatct 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
