Query= MSMg01no365_k05.b1 MSMg01no365_k05.b1 CHROMAT_FILE:
MSMg01no365_k05.b1 PHD_FILE: MSMg01no365_k05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:11 2005
(283 letters)
>mm_chr14_77015679_77016361
Length = 683
Score = 485 bits (251), Expect = e-142
Identities = 275/283 (97%)
Strand = Plus / Minus
Query: 1 acctcctaagttgaccacggccacataagctcctcctcccacagggctgctgaaacctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 acctcctaagttgaccacggccacataagctcctcctcccacagggctgctgaaacctaa 424
Query: 61 cctagcccaatggtggcagatatttgccatgtaaagtgacttttcaggccatttgagtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cctagcccaatggtggcagatatttgccatgtaaagtgacttttcaggccatttgagtct 364
Query: 121 ttgcctgatgagtaacacagatatagatccatccagttaagaaatatttatcagagaact 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 363 ttgcctgatgagtaacacagatatagatccatccggttaagaaatatttatcagagaact 304
Query: 181 ttccacatgtccaaaacccacactgcaagtgtagctgtaaaaccaaaccaaacagatctg 240
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 303 ttccacatgcccaaaacccacactgcaagtggagctgtaaaaccaaaccaaacagatctg 244
Query: 241 tattcacataggttctttattctgttagaggccaattatcaga 283
|||||||||||| | |||||||||||||||||||||||||
Sbjct: 243 tattcacatagggcccagattctgttagaggccaattatcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no365_k05.g1 MSMg01no365_k05.g1 CHROMAT_FILE:
MSMg01no365_k05.g1 PHD_FILE: MSMg01no365_k05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:11 2005
(485 letters)
>mm_chr14_76830161_76831046
Length = 886
Score = 870 bits (450), Expect = 0.0
Identities = 477/486 (98%), Gaps = 1/486 (0%)
Strand = Plus / Plus
Query: 1 atcattttcctcctttctgttggaatgcaaatttcatttgttgttggaaaggttgcatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcattttcctcctttctgttggaatgcaaatttcatttgttgttggaaaggttgcatta 260
Query: 61 ggagttgttgtacttaagagttgttgcagaagttagtcacattttcttttgttttcgtga 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 ggagttgttgtacttaagagttgttgcagaagttagtcacgttttcttttgttttcgtga 320
Query: 121 atgagcattggagctgttgaaagtgacagctggggttttt-gggtgcagtgaagcccaga 179
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 atgagcattggagctgttgaaagtgacagctggggtttttggggtgcagtgaagcccaga 380
Query: 180 aatgaggtgctggcttaggtcatcactgggtactgactggaccctgtctgctccctaatt 239
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 aatgaggtgctggcttaggtcatcactgggtactgattggaccctgtctgctccctaatt 440
Query: 240 ctcactgtcactggtgggagggagtagctgctgtgaaagctcatcagtttacctccactt 299
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 441 ctcactgtcactagtgggagggagtagctgctgtgaaagctcgtcagtttacctctacgc 500
Query: 300 gtgaccttcccagaccttctgtctccgcgggccaggccacgagttaagtgtgtggaaggt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgaccttcccagaccttctgtctccgcgggccaggccacgagttaagtgtgtggaaggt 560
Query: 360 aaggctccttttggaatttttcttcgtttcagttatttttcaagttgtactcagagtcta 419
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 aaggctccttttggaatttttcttagtttcagttatttttcaagttgtactcagagtcta 620
Query: 420 agcccatgaggctttacagtggcttattataaatagatctaatatgtaaaaccaaaagct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agcccatgaggctttacagtggcttattataaatagatctaatatgtaaaaccaaaagct 680
Query: 480 tttaag 485
||||||
Sbjct: 681 tttaag 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 886
Length adjustment: 10
Effective length of query: 475
Effective length of database: 876
Effective search space: 416100
Effective search space used: 416100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
