Query= MSMg01no367_g20.b1 MSMg01no367_g20.b1 CHROMAT_FILE:
MSMg01no367_g20.b1 PHD_FILE: MSMg01no367_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:35 2005
(520 letters)
>mm_chr14_17081142_17082062
Length = 921
Score = 984 bits (509), Expect = 0.0
Identities = 515/517 (99%), Gaps = 1/517 (0%)
Strand = Plus / Plus
Query: 5 gaattcggaaaa-acacaaatcagaaacccagaagagttctgagctatgctctgtttttg 63
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcggaaaatacacaaatcagaaacccagaagagttctgagctatgctctgtttttg 264
Query: 64 aagccggacactagtaaccaaagggcaagactgcagtaaattcccctgtgagcccagcct 123
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 265 aagccggacactagtaaccaaagggcaagactgcagtaaattcccgtgtgagcccagcct 324
Query: 124 aggccacagaccatgatcactttcccttccccataaccgcccccaccccaccccaccccc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggccacagaccatgatcactttcccttccccataaccgcccccaccccaccccaccccc 384
Query: 184 caaaaaaaagacataacaaaaacttgctcggtcttctggagtcttttcttccacaaaaga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caaaaaaaagacataacaaaaacttgctcggtcttctggagtcttttcttccacaaaaga 444
Query: 244 cttttatctaccgtaaaaagaaggctgtgcaattatctctgggaccctacccgacacaag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cttttatctaccgtaaaaagaaggctgtgcaattatctctgggaccctacccgacacaag 504
Query: 304 cagccaccacagctcgagatctactccactggctcggccccttgtaccccgtaccccaac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cagccaccacagctcgagatctactccactggctcggccccttgtaccccgtaccccaac 564
Query: 364 gttcgcaaccggcctctccgcggctcgccccgcccctagcccctcccggaacgccccgcc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gttcgcaaccggcctctccgcggctcgccccgcccctagcccctcccggaacgccccgcc 624
Query: 424 cctcggctcctcgccccgccctctggccgcaggcctctgcggcggcctaggcgctcctca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cctcggctcctcgccccgccctctggccgcaggcctctgcggcggcctaggcgctcctca 684
Query: 484 gcgcctgctcagtgcgggccgcggtgcgcgaggtggc 520
|||||||||||||||||||||||||||||||||||||
Sbjct: 685 gcgcctgctcagtgcgggccgcggtgcgcgaggtggc 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 921
Length adjustment: 10
Effective length of query: 510
Effective length of database: 911
Effective search space: 464610
Effective search space used: 464610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_g20.g1 MSMg01no367_g20.g1 CHROMAT_FILE:
MSMg01no367_g20.g1 PHD_FILE: MSMg01no367_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:35 2005
(501 letters)
>mm_chr14_17223162_17224062
Length = 901
Score = 789 bits (408), Expect = 0.0
Identities = 417/420 (99%), Gaps = 1/420 (0%)
Strand = Plus / Minus
Query: 82 cctaaaagctttcggaattcgtgacaaaaatgaaataacacaagggagagggagagatgg 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cctaaaagctttcggaattcgtgacaaaaatgaaataacacaagggagagggagagatgg 842
Query: 142 cttagtggttaagaacactgtctgctcttccagacatccggagttcagtccccagcaacc 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 cttagtggttaagaacactgtctgctcttccagacatccggagttcagtccccagcaacc 782
Query: 202 acttctggtgccctcttttggcatgcagctgcatattcagatagagcatcatacataaaa 261
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 781 acttctggtgccctcttttggcatgcaggtgcatattcagatagagcatcatacataaaa 722
Query: 262 taaattaaatattttttaatagatgaaacaacagagtccaggtgctcaaagacatctcac 321
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 taaattaaata-tttttaatagatgaaacaacagagtccaggtgctcaaagacatctcac 663
Query: 322 aggataaatgaaatcacaaacaaagccaccacacacacaagcacatattacatgtataac 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aggataaatgaaatcacaaacaaagccaccacacacacaagcacatattacatgtataac 603
Query: 382 atcctcatgacaaaggaaaaagaactatgttaaccttaccaagagaacacagagaaacaa 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 atcctcatgacaaaggaaaaagaactatgttaaccttaccaagagaacacagagaaacaa 543
Query: 442 atcacagcagacttctaatcataatccatgccaagaaagaattcagtagcatctttacat 501
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 542 atcacagcagacttctaatcataatccatgccaagaaagaattcagtagtatctttacat 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
