Query= MSMg01no368_d13.b1 MSMg01no368_d13.b1 CHROMAT_FILE:
MSMg01no368_d13.b1 PHD_FILE: MSMg01no368_d13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:36 2005
(629 letters)
>mm_chr14_115526702_115527732
Length = 1031
Score = 1064 bits (550), Expect = 0.0
Identities = 554/556 (99%), Gaps = 2/556 (0%)
Strand = Plus / Minus
Query: 1 ataaagggaggtatgatacctccaggagacaatgagtgctttgtgactactggcttaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ataaagggaggtatgatacctccaggagacaatgagtgctttgtgactactggcttaaac 497
Query: 61 ggccattactgaagtattcaaattctagctttagttctactctgtattcgtggaaattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ggccattactgaagtattcaaattctagctttagttctactctgtattcgtggaaattga 437
Query: 121 gaata--tttttttaatgtggaagagatacaactgtaataaaaacaagatgaaatcaaac 178
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gaatatttttttttaatgtggaagagatacaactgtaataaaaacaagatgaaatcaaac 377
Query: 179 cctgtaatcttgagtttgaagtataaataaaaatcatcaagaacttttcctttaagaaat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cctgtaatcttgagtttgaagtataaataaaaatcatcaagaacttttcctttaagaaat 317
Query: 239 atgtttcctaatgttttaggaaagatctagaagttataactctccagggcccacgtcatg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 atgtttcctaatgttttaggaaagatctagaagttataactctccagggcccacgtcatg 257
Query: 299 gccatgaaatgacatttctctcaagaagaaaatcagcctctttaagaaatggctttgggc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gccatgaaatgacatttctctcaagaagaaaatcagcctctttaagaaatggctttgggc 197
Query: 359 ttaaagagatggctcccctactcagtgtgcacactgtacttatagaggacatgagtgtgg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ttaaagagatggctcccctactcagtgtgcacactgtacttatagaggacatgagtgtgg 137
Query: 419 tccccagcacccatgtctagaggttcagtctcctggaactccagctccagaggacatgat 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 tccccagcacccatgtctagaggttcagtctcctggaactccagctccagaggacatgat 77
Query: 479 gccttcatctgatctctatagaccttggcattctcatgctcagagagacttttgagacag 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 gccttcatctgatctctatagaccttggcattctcatgctcagagagacttttgagacag 17
Query: 539 gatttcactcagtcac 554
||||||||||||||||
Sbjct: 16 gatttcactcagtcac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1031
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1021
Effective search space: 631999
Effective search space used: 631999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_d13.g1 MSMg01no368_d13.g1 CHROMAT_FILE:
MSMg01no368_d13.g1 PHD_FILE: MSMg01no368_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:36 2005
(549 letters)
>mm_chr14_115326327_115327275
Length = 949
Score = 1000 bits (517), Expect = 0.0
Identities = 541/549 (98%)
Strand = Plus / Plus
Query: 1 attaggaagattgagtttttaagattagggaggtcagggcactcagcagaacactgactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attaggaagattgagtttttaagattagggaggtcagggcactcagcagaacactgactc 260
Query: 61 caattatcctcatgattcaagaggagagggcggtgaaggagatgccaagcgcgttcatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caattatcctcatgattcaagaggagagggcggtgaaggagatgccaagcgcgttcatat 320
Query: 121 cactagagtaacagtctagaaatagaggtagccttgtccaacacaccggggtgttcttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cactagagtaacagtctagaaatagaggtagccttgtccaacacaccggggtgttcttaa 380
Query: 181 accaagcctgcaggagagcgttgttgagtttgagcaagcccctgaagctttctaagctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accaagcctgcaggagagcgttgttgagtttgagcaagcccctgaagctttctaagctca 440
Query: 241 ggctcaagggagacaacgtgccataaagcacaagacccaggctccagcttcacctggttt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 ggctcaagggagacaacgtgccataaagcacaagacccaggctccagcttcagctggttt 500
Query: 301 gaatcctagcctttccaccttccacctggcaaagctgatgctggccacaacctctaatcg 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 gaatcctagcctttccaccttccacctggcaaagctgatgctggccacatcctctaatcg 560
Query: 361 caatgcagagcaaacagcccctgcattaaagacttagtacaaggactaaatgaaatgaca 420
||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 caatgcagagctaacagcccctgcattaaagacttagtacaagaactaaatgaaatgaca 620
Query: 421 atggaacaaccaagcctttggacccatgtctgaggaagagcaaacagccgaggaatgagt 480
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atggaacaaccaagcctttgggcccatgtctgaggaagagcaaacagccgaggaatgagt 680
Query: 481 attatggcaaattaatttgcagatatcttttgaagaataatactaaatgcaagcatattt 540
|||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||
Sbjct: 681 attatggcaaattaatttgcagatatcttttgaagaataataataaatgcaaacacattt 740
Query: 541 ccttataaa 549
|||||||||
Sbjct: 741 ccttataaa 749
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
