Query= MSMg01no369_h10.b1 MSMg01no369_h10.b1 CHROMAT_FILE:
MSMg01no369_h10.b1 PHD_FILE: MSMg01no369_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:11 2005
(479 letters)
>mm_chr14_14451505_14452383
Length = 879
Score = 814 bits (421), Expect = 0.0
Identities = 440/451 (97%), Gaps = 8/451 (1%)
Strand = Plus / Minus
Query: 37 accactgggtcccggggttcaatatctcagcttgactggagaccagattttctgtgtata 96
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 879 accactgggtcccggggttcaatatctcagcttgattggagaccagattttctgtgtata 820
Query: 97 gcccaatgcccaacatgtgctaggctaggctggctggccccagagtctccaaaattggcc 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 gcccaatgcccaacatgtgctaggctaggctggctggccccagagtctccaaaattggcc 760
Query: 157 atttctacctctacagtgctatgagtgagtgctatgagtaagtgctatgagtgcatgtga 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 atttctacctctacagtgctatgagtgagtgctatgagtaagtgctatgagtgcatgtga 700
Query: 217 ttatgagtatgt--------actccacttgttatgtgcattctgggacttgaaccctggt 268
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ttatgagtatgtactaacacactccacttgttatgtgcattctgggacttgaaccctggt 640
Query: 269 ccatatgactgaggtacaccccagcctcacttcctattattgatggaagattccagagca 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ccatatgactgaggtacaccccagcctcacttcctattattgatggaagattccagagca 580
Query: 329 atactgctctgagattgtgacagggctgatatccccctgccttcatcagcggcaccacag 388
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 579 atactgctctgagattgtgacagggctgatatccccctgccttcatcagcagcaccacag 520
Query: 389 atccacccatctattgttgtggcttctttgttttactgctcttcccttgttttattctcc 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 atccacccatctattgttgtggcttctttgttttactgctcttcccttgttttattctcc 460
Query: 449 catctgtcaccctgttcagcttcctagcatc 479
|||||||||||||| ||||||||||||||||
Sbjct: 459 catctgtcaccctggtcagcttcctagcatc 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no369_h10.g1 MSMg01no369_h10.g1 CHROMAT_FILE:
MSMg01no369_h10.g1 PHD_FILE: MSMg01no369_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:11 2005
(490 letters)
>mm_chr14_14305857_14306746
Length = 890
Score = 940 bits (486), Expect = 0.0
Identities = 489/490 (99%)
Strand = Plus / Plus
Query: 1 tcagtagggtaagtcctagtatgtggtgcccatgagaggggaagaagctcactgaaggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagtagggtaagtcctagtatgtggtgcccatgagaggggaagaagctcactgaaggtt 260
Query: 61 tgcacaggcccacagagtccagtggacactttgaattttccaccagctttggtccagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcacaggcccacagagtccagtggacactttgaattttccaccagctttggtccagaaa 320
Query: 121 agatggctctgctacctctgttagtcagtgacatagcatgttgttagtcccttactcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatggctctgctacctctgttagtcagtgacatagcatgttgttagtcccttactcttg 380
Query: 181 gctgattctttgatattgatatacctactactgactgacttaatgctgttgctttcatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctgattctttgatattgatatacctactactgactgacttaatgctgttgctttcatta 440
Query: 241 acccataaaggaggagtttcaaactgtttcttatggataattattctcacgtggctcctt 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acccagaaaggaggagtttcaaactgtttcttatggataattattctcacgtggctcctt 500
Query: 301 ctcatcctagttatgaatgtacctttttggaaaacactagcatttgggccaccaaactgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcatcctagttatgaatgtacctttttggaaaacactagcatttgggccaccaaactgc 560
Query: 361 ttttgatatatggtgagtagttgaattattgcatttagtaaagtctacctactagataga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttgatatatggtgagtagttgaattattgcatttagtaaagtctacctactagataga 620
Query: 421 ctaattcttcctcaaattgctcagtttacattgtttatactgtctccatcatcatttata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctaattcttcctcaaattgctcagtttacattgtttatactgtctccatcatcatttata 680
Query: 481 ctgtctcttt 490
||||||||||
Sbjct: 681 ctgtctcttt 690
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space: 422400
Effective search space used: 422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
