Query= MSMg01no370_b06.b1 MSMg01no370_b06.b1 CHROMAT_FILE:
MSMg01no370_b06.b1 PHD_FILE: MSMg01no370_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:00 2005
(420 letters)
>mm_chr14_102743664_102744485
Length = 822
Score = 739 bits (382), Expect = 0.0
Identities = 407/416 (97%), Gaps = 2/416 (0%)
Strand = Plus / Plus
Query: 5 gaattcacttgtggttattaatttatttaatttttacatgagtggacttactttgcagga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttgtggttattaatttatttaatttttacatgagtggacttactttgcagga 264
Query: 65 tgttaggatacagtacatgaaggaaaccataagactgctctagttccaacctcagtactg 124
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgctaggatacagtacatgcaggaaaccataagactgctctagttccaacctcagtactg 324
Query: 125 actcggtgaaggcagttgactatgaggtataaattggccaaatgtgctgaaattgactag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actcggtgaaggcagttgactatgaggtataaattggccaaatgtgctgaaattgactag 384
Query: 185 aaagaattatgcctgtacttgctatcttttagagactctctttatgctttaactgaaaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaagaattatgcctgtacttgctatcttttagagactctctttatgctttaactgaaaaa 444
Query: 245 aaat--ttataaaactgagttaaaataagggcagagacgtatgtaatagatattttgaca 302
||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 445 aaaaacttataaaactgagttcaaataagggcagaaacgtatgtaatagatattttgaca 504
Query: 303 tgtataagttgcacatatttcaagaaaaacaattccctaaaaaggagaaggaagagctct 362
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtatgagttgcacatatttcaagaaaaacaattccctaaaaaggagaaggaagagctct 564
Query: 363 gaggtccctctgttcagcatcagaattctgggaagttctagaaagttttccaaaag 418
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 565 gaggtccctctgttcagcatcagaattctgggaagttctagaatgttttccaaaag 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 822
Length adjustment: 9
Effective length of query: 411
Effective length of database: 813
Effective search space: 334143
Effective search space used: 334143
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_b06.g1 MSMg01no370_b06.g1 CHROMAT_FILE:
MSMg01no370_b06.g1 PHD_FILE: MSMg01no370_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:00 2005
(423 letters)
>mm_chr14_102904873_102905695
Length = 823
Score = 803 bits (415), Expect = 0.0
Identities = 421/423 (99%)
Strand = Plus / Minus
Query: 1 acctctgactagccaaaggtttgctaacatctagaatctgaaaagaacagttgaagtggt 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 acctctgactagccaaaagtttgctaacatctagaatctgaaaagaacagttgaagtggt 564
Query: 61 gttaaaggaaagtgtggattcaatcaacaactgaaatcgggtattcctgcccagagtgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gttaaaggaaagtgtggattcaatcaacaactgaaatcgggtattcctgcccagagtgtg 504
Query: 121 atgcatccacatagattagtctcttgctgaataaagaattttagtgtttctcatgtgaac 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atgcatccacgtagattagtctcttgctgaataaagaattttagtgtttctcatgtgaac 444
Query: 181 cacacagttctcttgtggagacaaaccaagttgggacagacttgatttcattttccttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cacacagttctcttgtggagacaaaccaagttgggacagacttgatttcattttccttag 384
Query: 241 aaacaagtacaaaagaaataatttgaggcctggataaaaatgtcttataaacatacaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aaacaagtacaaaagaaataatttgaggcctggataaaaatgtcttataaacatacaatt 324
Query: 301 acattttggctttctgcagactcaactcattaagccatgagtgattgcagatgttgtggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 acattttggctttctgcagactcaactcattaagccatgagtgattgcagatgttgtggt 264
Query: 361 cagattctcctggccaaagatttggctactcaggttatcctcaagggaaactggcaaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cagattctcctggccaaagatttggctactcaggttatcctcaagggaaactggcaaacc 204
Query: 421 caa 423
|||
Sbjct: 203 caa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
