Query= MSMg01no370_l19.b1 MSMg01no370_l19.b1 CHROMAT_FILE:
MSMg01no370_l19.b1 PHD_FILE: MSMg01no370_l19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:53 2005
(452 letters)
>mm_chr14_67250019_67250871
Length = 853
Score = 806 bits (417), Expect = 0.0
Identities = 441/449 (98%), Gaps = 1/449 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttaaatctctaagactaacacatgagatgatatccaaaccaactactaactag 63
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 652 ggaattcttaaatctctaagactaacacatgagatgatatctaaaccaactactaactag 593
Query: 64 ctattgcacaaactacaatggccactcacttcaaccaggtaggtttccaaacctcctcag 123
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 592 ctattgcacaaaccacaatggctactcacttcaaccaggtaggtttccaaacctcctcag 533
Query: 124 ctttcgaatttcaatctttgtagctcgaatgctcagtatgagccttctggttgataa-cc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 532 ctttcgaatttcaatctttgtagctcgaatgctcagtatgagccttctggttgctaaccc 473
Query: 183 ccagctgacaaatgggaagatagtcatctgctacttactcttaaatttcttatcagctta 242
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 472 ccagctgacaaatgggaagatagtcatctgctacttactcttaattttcttatcagctta 413
Query: 243 tatttattatccaaaataatcgcttataaacatgacatttttattcaaatatgtcatgtg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tatttattatccaaaataatcgcttataaacatgacatttttattcaaatatgtcatgtg 353
Query: 303 ctttgaccatattcaccccattagcttcgctctagttccctacattttcccaaatagttt 362
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ctttgaccgtattcaccccattagcttcgctctagttccctacattttcccaaatagttt 293
Query: 363 tacattctacaatcatgtcatatgtaatatttatgtatgttatacacatatattcataga 422
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 292 tacattctacaatcatgtcatatgtgatatttatgtatgttatacacatatattcataga 233
Query: 423 tcaagttgcacacatgcaacgtctgacat 451
|||||||||||||||||||||||||||||
Sbjct: 232 tcaagttgcacacatgcaacgtctgacat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 853
Length adjustment: 10
Effective length of query: 442
Effective length of database: 843
Effective search space: 372606
Effective search space used: 372606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_l19.g1 MSMg01no370_l19.g1 CHROMAT_FILE:
MSMg01no370_l19.g1 PHD_FILE: MSMg01no370_l19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:53 2005
(369 letters)
>mm_chr14_67105248_67106016
Length = 769
Score = 706 bits (365), Expect = 0.0
Identities = 368/369 (99%)
Strand = Plus / Plus
Query: 1 ctagttaaggtttcccttgaatctctttggagcagtgcctatttagtattctcagagttt 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagttaaggttttccttgaatctctttggagcagtgcctatttagtattctcagagttt 260
Query: 61 agcttgttaatgtctttgttactctctctgcacttgtcttcataagcaaaattggctact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcttgttaatgtctttgttactctctctgcacttgtcttcataagcaaaattggctact 320
Query: 121 ttgatttgttcaaagaccattttccttgggccagagagatgactgggcagttgggagcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgatttgttcaaagaccattttccttgggccagagagatgactgggcagttgggagcac 380
Query: 181 ttgctgctcttcagagaacctaagttcagtttccagcactcacattgcctatgtcacaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgctgctcttcagagaacctaagttcagtttccagcactcacattgcctatgtcacaat 440
Query: 241 caactgtaattccagctccaaggaatctgatgccatcttctgacctctgggggcaccatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caactgtaattccagctccaaggaatctgatgccatcttctgacctctgggggcaccatt 500
Query: 301 acttatgtgtgagtgtacacatgcataacacacatacacacacacacatggggagggagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acttatgtgtgagtgtacacatgcataacacacatacacacacacacatggggagggagg 560
Query: 361 gaggaagag 369
|||||||||
Sbjct: 561 gaggaagag 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
