GATGGTAGGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXATCTGGACATCTGACATCAAGGCAGCT
GACTCACTGGCTGGCCACATGCTGAGATGTAGGAGCTGGCCCTACCTGAA
TGCTCTCCTGGAGATTAAATTTTAACAAGCTAGAAGGCTGAGGGGATGGT
GGTGGGGGGCGGAGATCATCAAGAAGGAAAGAAAAGAGGTGTAAAGTCAA
AGATGACTGAAATAAATTCATAGGAATGGGGGCAGGGATGACCCTGGGAA
GTAGCAAAGTACTGAGAAGATCTAAGATTCAGAAATGAAGACAAAAACAA
TCAAACCCAGATTTGCGGAGCATCGGAGGGGGCAGGGGTGGTTATATCTC
CAGCTACCCTGATGTCCATTCAGTTGGCATCGCCTTAGGATGGCTGTTTG
CATCCAGGAAGCTGAATACGAAAGTGACAAGAACTTGAGGCTGAGAAACT
GAGATTACTGATGTTAAGGATTCATCAGAAATCAACTCTTTTTCCTGTCT
ACTCCAAGACAGCGAGGCAGTTGCCGCCGCTGCGAGTTGAACTTCAGGAT
GGTACGGTTTGATGGCTCAGACTACCAGTATTGAATCTGGCACTTCCGGC
TTGTCTTCTCCCTGTTTTTCAAGGACGATTTTCTCTCTTTCGGAATAACC
CCATATTGCTCCTGACGTCGTTTGTATTTTACTCAGCTGTATTTATTACT
CCGTGAGT

ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTGCCGGCGTTACACTAGCTCGGGTGAGAACACCTAACTCAAACCCA
CTCTGCTTTGCTTTGGTTTCTGTTGATGGCTTAGGTGCAAGCCATCAAGC
CACCAAGGGCTGCCCATGTTTCTGAGCCTCAGTGGTCAGAAGGAAGATAT
CAGTTTGATGCTTTCCTCATTCCACAGGCAGGGCCCAAGGCTGCCAACCC
CAGTGCAAGGCAAACCCTCACTCCCCAGTGATGTTTGCCATGGTGGCAGA
AATGCTGTGTTTAATTGCATCCCACCCCTCAACTACACCTACTGCAGAAC
AGACTCATTCCGCTTTACTCTCTGATCCATTTTCCCATGATTTGGGGGTC
AAATCATTTTTATTTTCTCACATAAAGAAAGAAGGGGGTGGGGGAAGCCA
ATTAAGTTGCAAGCTGATGCTCCAGTCTTTGACTAAGAGGCACACAGATG
AGGCATTCAGAAACCCGAGGATTGTTTTCAGCTCCCTCCTTGTCTCCCTG
ACGCCCTTGAGCTTAACTGCAGTCAGGTCACAAGTATGTTTATGACCAAA
ACTGCCAGAGTCCTTTGCCTGTGACCTTGTACTCTTGAGAAGGAGTGTGA
CTCTGAAATTCATAAATAAATAAATCTGAAACACAGTGTTAGGAGCACAA
GGTACAAGAATCTGGGCTTTCCTTGGAAAGAAAAAAAAAAGGCTTTGTAG
AACGGGAAG

Query= MSMg01no371_e04.b1 MSMg01no371_e04.b1 CHROMAT_FILE:
MSMg01no371_e04.b1 PHD_FILE: MSMg01no371_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:37 2005
         (269 letters)



>mm_chr14_120776609_120777277
          Length = 669

 Score =  513 bits (265), Expect = e-150
 Identities = 268/269 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atctggacatctgacatcaaggcagctgactcactggctggccacatgctgagatgtagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctggacatctgacatcaaggcagctgactcactggctggccacatgctgagatgtagg 260

                                                                       
Query: 61  agctggccctacctgaatgctctcctggagattaaattttaacaagctagaaggctgagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agctggccctacctgaatgctctcctggagattaaattttaacaagctagaaggctgagg 320

                                                                       
Query: 121 ggatggtggtggggggcggagatcatcaagaaggaaagaaaagaggtgtaaagtcaaaga 180
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaatggtggtggggggcggagatcatcaagaaggaaagaaaagaggtgtaaagtcaaaga 380

                                                                       
Query: 181 tgactgaaataaattcataggaatgggggcagggatgaccctgggaagtagcaaagtact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgactgaaataaattcataggaatgggggcagggatgaccctgggaagtagcaaagtact 440

                                        
Query: 241 gagaagatctaagattcagaaatgaagac 269
           |||||||||||||||||||||||||||||
Sbjct: 441 gagaagatctaagattcagaaatgaagac 469


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 669
Length adjustment: 9
Effective length of query: 260
Effective length of database: 660
Effective search space:   171600
Effective search space used:   171600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no371_e04.g1 MSMg01no371_e04.g1 CHROMAT_FILE:
MSMg01no371_e04.g1 PHD_FILE: MSMg01no371_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:37 2005
         (556 letters)



>mm_chr14_120972757_120973712
          Length = 956

 Score =  951 bits (492), Expect = 0.0
 Identities = 537/552 (97%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttgccggcgttacactagctcgggtgagaacacctaactcaaacccactctgct 64
           |||||||||||||||  | |||||||| || |||||||||||||||||||||||||||||
Sbjct: 791 gaattcttgccggcgagatactagctcaggcgagaacacctaactcaaacccactctgct 732

                                                                       
Query: 65  ttgctttggtttctgttgatggcttaggtgcaagccatcaagccaccaagggctgcccat 124
           ||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 731 ttgctttagtttctgttgatggcttaggagcaagccatcaagccaccaagggccgcccat 672

                                                                       
Query: 125 gtttctgagcctcagtggtcagaaggaagatatcagtttgatgctttcctcattccacag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gtttctgagcctcagtggtcagaaggaagatatcagtttgatgctttcctcattccacag 612

                                                                       
Query: 185 gcagggcccaaggctgccaaccccagtgcaaggcaaaccctcactccccagtgatgtttg 244
           ||||| ||||||||||||| |||||||||||||||| |||||  ||||||||||||||||
Sbjct: 611 gcaggacccaaggctgccatccccagtgcaaggcaagccctcgttccccagtgatgtttg 552

                                                                       
Query: 245 ccatggtggcagaaatgctgtgtttaattgcatcccacccctcaactacacctactgcag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ccatggtggcagaaatgctgtgtttaattgcatcccacccctcaactacacctactgcag 492

                                                                       
Query: 305 aacagactcattccgctttactctctgatccattttcccatgatttgggggtcaaatcat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aacagactcattccgctttactctctgatccattttcccatgatttgggggtcaaatcat 432

                                                                       
Query: 365 ttttattttctcacataaagaaagaagggggtgggggaagccaattaagttgcaagctga 424
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 431 ttttattttctcacgtaaagaaagaagggggtgggggaagccaattaagttgcaagcaga 372

                                                                       
Query: 425 tgctccagtctttgactaagaggcacacagatgaggcattcagaaacccgaggattgttt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tgctccagtctttgactaagaggcacacagatgaggcattcagaaacccgaggattgttt 312

                                                                       
Query: 485 tcagctccctccttgtctccctgacgcccttgagcttaactgcagtcaggtcacaagtat 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tcagctccctccttgtctccctgacgcccttgagcttaactgcagtcaggtcacaagtat 252

                       
Query: 545 gtttatgaccaa 556
           ||||||||||||
Sbjct: 251 gtttatgaccaa 240


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space:   516516
Effective search space used:   516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)