Query= MSMg01no372_a14.b1 MSMg01no372_a14.b1 CHROMAT_FILE:
MSMg01no372_a14.b1 PHD_FILE: MSMg01no372_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:42 2005
(574 letters)
>mm_chr14_80732096_80733073
Length = 978
Score = 1021 bits (528), Expect = 0.0
Identities = 564/578 (97%), Gaps = 4/578 (0%)
Strand = Plus / Minus
Query: 1 aggcgaggtgtggcttctatctcggtttttcagaagaaatcttttaagtcttacaattgc 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 778 aggcgaggtgtggcttctatctcggtgtttcagaagaaatcttttaagtcttacaattgc 719
Query: 61 ccaatgatagaagtgtctgtttttcatgatggcatctcagaccacacatgaaaatctgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ccaatgatagaagtgtctgtttttcatgatggcatctcagaccacacatgaaaatctgtg 659
Query: 121 ctaaagagatgatggaagatgaggccaaccagatgaggatactaacgacaggagctggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ctaaagagatgatggaagatgaggccaaccagatgaggatactaacgacaggagctggcc 599
Query: 181 atactggaaagaaaagtgtgtgattagagaagtagaggtttgggccgtgtgaagagtagc 240
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 598 atactggaaagaaaagtgtgtgattagagaagtagaggtttgggctgtgtaaagagtagc 539
Query: 241 tgacctctggtgagaggagaagggctgtagatgacaacagaaacacaatcaatcatgcat 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tgacctctggggagaggagaagggctgtagatgacaacagaaacacaatcaatcatgcat 479
Query: 301 atcaaataaatcaatgaaattgctataaactaaaactgagatacaccttcctgtgtagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 atcaaataaatcaatgaaattgctataaactaaaactgagatacaccttcctgtgtagca 419
Query: 361 actatc----atatactatgacagtcccagagtctcctcagtgtatccctttctttgtct 416
|||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 418 actatcatatatatactataacagtcccagagtctcctcagtatatccctttctttgtct 359
Query: 417 atccctgatctgagtccttttgctatagtaaaaccatacttgtaagtataatactattat 476
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 358 atccctgatctgagtccttttgctataataaaaccatacttgtaagtataatactattat 299
Query: 477 aagttctcagacttgacctacaaatatcatcaaacctgaaagacttcatggacccaaatt 536
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aagttctcaaacttgacctacaaatatcatcaaacctgaaagacttcatggacccaaatt 239
Query: 537 tggggttagctggtttaaaaggaggtctgctgtgaggc 574
||||||||| |||||| |||||||||||||||||||||
Sbjct: 238 tggggttagttggtttgaaaggaggtctgctgtgaggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 978
Length adjustment: 10
Effective length of query: 564
Effective length of database: 968
Effective search space: 545952
Effective search space used: 545952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_a14.g1 MSMg01no372_a14.g1 CHROMAT_FILE:
MSMg01no372_a14.g1 PHD_FILE: MSMg01no372_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:42 2005
(461 letters)
>mm_chr14_80572534_80573394
Length = 861
Score = 876 bits (453), Expect = 0.0
Identities = 459/461 (99%)
Strand = Plus / Plus
Query: 1 tccctgagaggaacagctgggtcttttcacattttgtctttatgcccaattaacccctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccctgagaggaacagctgggtcttttcacattttgtctttatgcccaattaacccctaa 260
Query: 61 ctacagccctactgagttgttattgttgcaaaggaaaaaaatcaactgtgagacccacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctacagccctactgagttgttattgttgcaaaggaaaaaaatcaactgtgagacccacat 320
Query: 121 gtctagacagtgaaggacttagcacagaaattccttctttgtgccagaggttgccaagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtctagacagtgaaggacttagcacagaaattccttctttgtgccagaggttgccaagtg 380
Query: 181 agtggtgcaggagataggaagagtagcctgcacagctggtagcagctgtacttgcccatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtggtgcaggagataggaagagtagcctgcacagctggtagcagctgtacttgcccatg 440
Query: 241 ggctcttcagacctagttttgaagccagaggcgctaatgatggggacagaaaaagaacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggctcttcagacctagttttgaagccagaggcgctaatgatggggacagaaaaagaacaa 500
Query: 301 cagcatgtggcatccatgcaaggtgccagtacttgtatctcttccccatctgttcccatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 501 cagcatgtggcatccatgcaaggtgccagtacttgtatctcttccccatctgttcccgtc 560
Query: 361 acccttgcactctcccatttgctcacacatggataggcaatgggtgaccaaatgctgcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acccttgcactctcccatttgctcacacatggataggcaatgggtgaccaaatgctgcct 620
Query: 421 gagggactggacctgatgctgttaattactaggagcgttga 461
||||||||||||||||||||||||||||||||||| |||||
Sbjct: 621 gagggactggacctgatgctgttaattactaggagtgttga 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
