Query= MSMg01no372_i01.b1 MSMg01no372_i01.b1 CHROMAT_FILE:
MSMg01no372_i01.b1 PHD_FILE: MSMg01no372_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:16 2005
(274 letters)
>mm_chr14_73729626_73730297
Length = 672
Score = 472 bits (244), Expect = e-137
Identities = 263/270 (97%), Gaps = 2/270 (0%)
Strand = Plus / Plus
Query: 4 ggaattcactgtgttgtctattgtctcaaattcctggcagtcctcctgcctcagcctccc 63
|||||||||||||| | | ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 204 ggaattcactgtgtagcccattgtctcaaattcctggcagccctcctgcctcagcctccc 263
Query: 64 aagtgctggaattatgcccagtttaacagtttgtttttatttcactttccaaaagttcaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aagtgctggaattatgcccagtttaacagtttgtttttatttcactttccaaaagttcaa 323
Query: 124 gacaattggaaggtttaaaggaatgaacagtttctgtgcagagagtatgggaaacaactg 183
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 324 gacaattggaaggtttaaaggaatgaacagtttctgtgcagag--tatgggaaacaactg 381
Query: 184 gcctctgaagaacttctgctctctgcggtggactcaggatcaggactcacgtcccttatg 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 acctctgaagaacttctgctctctgcggtggactcaggatcaggactcacgtcccttatg 441
Query: 244 tgtgtacttcttagattctttcaggttttg 273
||||||||||||||||||||||||||||||
Sbjct: 442 tgtgtacttcttagattctttcaggttttg 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 672
Length adjustment: 9
Effective length of query: 265
Effective length of database: 663
Effective search space: 175695
Effective search space used: 175695
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no372_i01.g1 MSMg01no372_i01.g1 CHROMAT_FILE:
MSMg01no372_i01.g1 PHD_FILE: MSMg01no372_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:16 2005
(373 letters)
>mm_chr14_73947408_73948180
Length = 773
Score = 690 bits (357), Expect = 0.0
Identities = 369/373 (98%)
Strand = Plus / Minus
Query: 1 cagactagtttgcccaccaggttaaagccaagcaatgcccttcagtacactgcagaaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 cagactagtttgcccaccaggttaaagccaagcaatgcccttcagtacactgcagaaggc 514
Query: 61 tttgcttcccccttcgcatctgaaggaccctggccaaggctcaccacttcagtgggacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tttgcttcccccttcgcatctgaaggaccctggccaaggctcaccacttcagtgggacct 454
Query: 121 gaagaccagagaaaactaaggttagtctacaaagatagggtgccgctttccttcctcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gaagaccagagaaaactaaggttagtctacaaagatagggtgccgctttccttcctcact 394
Query: 181 ctcgccctgtgggagtgttgacaagggcagcttgtccagggcaggtgcacacactctgtg 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ctcgacctgtgggagtgttgacaagggcagcttgtccagggcaggtgcacacactctgtg 334
Query: 241 aggattctctcattcctgcctcctgtcccttcttttcccttctgtgctttcgtgagggag 300
|||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 333 aggactccctcattcctgcctcctgtccctgcttttcccttctgtgctttcgtgagggag 274
Query: 301 gaaacagggcatgtggctagggtgtccatgtgtggttttggtgttcacagctgccattgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gaaacagggcatgtggctagggtgtccatgtgtggttttggtgttcacagctgccattgt 214
Query: 361 ctttccccaccag 373
|||||||||||||
Sbjct: 213 ctttccccaccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
