Query= MSMg01no373_b13.b1 MSMg01no373_b13.b1 CHROMAT_FILE:
MSMg01no373_b13.b1 PHD_FILE: MSMg01no373_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:59 2005
(509 letters)
>mm_chr14_111728644_111729552
Length = 909
Score = 866 bits (448), Expect = 0.0
Identities = 483/502 (96%), Gaps = 12/502 (2%)
Strand = Plus / Plus
Query: 8 gaattcacttgattagcaatggctgaccaagaaaatctaagaaaaataatgcttttctca 67
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcacttgattagaaatggctgaccaagaaaatctaagaaaaataatgcttttctca 267
Query: 68 atgtacttaactcaataatattagtaaatttgcctacattttattatgtggacactttag 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atgtacttaactcaataatattagtaaatttgcctacattttattatgtggacactttag 327
Query: 128 gagcgtatttttcaggctagcaccacagctaagtattttgttgttgttgttgttgttgtt 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gagcgtatttttcaggctagcaccacagctaagtattttgttgttgttgttgttgttgtt 387
Query: 188 gttgttgttgttgaaggtaaaaatagaaatataataaaatcaggattttttgcatttatt 247
| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 g------------aaggtaaaaatagaaatataataaaatcaggattttttgcatttatt 435
Query: 248 ttagcaacaaaattagtcaattaatttatgctatgtaagggtaagaaatgttttatttat 307
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 436 ttagcaacaaaattaatcaattaatttatgctatggaagggtaagaaatgttttatttat 495
Query: 308 tttaaccaatgaacttcttacagaaaaataagtccatagactttgacattatgtgctaga 367
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 496 tttaaccaatgaacttcttagagaaaaataagtccatagattttgacattatgtgctaga 555
Query: 368 catcttcatatgcttcctgctagcataaagctttgaccgaatctagaactttttattgta 427
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 556 catcttcatatgcttcctgctagcataaagctttgaaagaatctagaactttttattgta 615
Query: 428 atatggaaggtccatatatatttactatatttatagtcttatgaactatatattcagcat 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 atatggaaggtccatatatatttactatatttatagtcttatgaactatatattcagcat 675
Query: 488 gactatataaatcttacttcca 509
||||||||||||||||||||||
Sbjct: 676 gactatataaatcttacttcca 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_b13.g1 MSMg01no373_b13.g1 CHROMAT_FILE:
MSMg01no373_b13.g1 PHD_FILE: MSMg01no373_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:59 2005
(436 letters)
>mm_chr14_111851784_111852619
Length = 836
Score = 758 bits (392), Expect = 0.0
Identities = 425/436 (97%)
Strand = Plus / Minus
Query: 1 actttgtagaccaggctggcctcgaactcagaaatctgcctgcctctgcctcccgagtgc 60
||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 591 actttgtagaccaggctggcctcaaactcagaaatctgcctgcctgtgcctcccgagtgc 532
Query: 61 tgggattaaagaagtgtgccaccaagcatggcgagcatatacacaaacatacaagaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 531 tgggattaaagaagtgtgccaccaagcatggcgagcatatacacaaacataaaagaaaca 472
Query: 121 cacaagcacaggcatacgtctacacacagagatctgttatagatggaggttaggatgtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 cacaagcacaggcatacgtctacacacagagatctgttatagatggaggttaggatgtat 412
Query: 181 ttatacattgtttcttcttttatagttatttctcctgtcccttccaaaaatgtccccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ttatacattgtttcttcttttatagttatttctcctgtcccttccaaaaatgtccccttt 352
Query: 241 aaacactttttttgagagtgtaaaaaggagcttactgatagaaaataaatgtaggcagct 300
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 aaacactgcttttgagagtgtaaaaaggagcttactgatagaaaataaatgtaggcagct 292
Query: 301 gtttcaggatatttggtcacattgtgaatccttaaactgtattatttttttttaataatc 360
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 291 gtttcaggatatttggtcacattgtgaatccttaagctgtattattattttttaataatc 232
Query: 361 tgttcctaatttgctatggctcagcattaacacagacatctaatccatgagctttctgtg 420
|||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 231 tgtttctaattttctatggctcagcattaacacagacatctaatccatgagttttctgtg 172
Query: 421 tattgcaaatgggatt 436
||||||||||| ||||
Sbjct: 171 tattgcaaatgtgatt 156
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
