Query= MSMg01no373_c08.b1 MSMg01no373_c08.b1 CHROMAT_FILE:
MSMg01no373_c08.b1 PHD_FILE: MSMg01no373_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:03 2005
(588 letters)
>mm_chr14_9356269_9357256
Length = 988
Score = 1021 bits (528), Expect = 0.0
Identities = 564/576 (97%)
Strand = Plus / Minus
Query: 13 gaattccttgactccagagattagataccaagccctgttgagcaaaattagaactgttta 72
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 gaattccttgaccccagagattagataccaagccctgttgagcaaaattagaactgttta 729
Query: 73 tattttttctttgtaatccttactataatcacaatcactgaactgtttattgatttcttg 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 tattttttctttgtaatccttactataatcacaatcactgaactgtttattgatttcttg 669
Query: 133 ttttaatattcacctcccccatgaaggtacaacctcgttggctgaggtagtgtagcatcc 192
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 668 ttttaatattcacctcccccatgaaggtacaacctcgttggatgaggtagtgtagcatcc 609
Query: 193 tactccctttctcactcaacgccagccaggcagcacccaatcactattaaggaatgaatg 252
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 608 tactccctttctcactcaacgccagccagccagcacccaatcactattaaggaatgaatg 549
Query: 253 aagaaaggaataagcgagtacgcataggttctgtaagctttaaatgttattaaaggtggg 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 548 aagaaaggaataagcgagtacgcataggttctgtaagctttaaatgttattaaagatggg 489
Query: 313 aaggtattaacaacctgtttattagccatctactcccgccaagacacaactcaagtatgt 372
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 488 aaggtattaacaacctgtttattagccatctactcccaccaagacacaactcaagtatgt 429
Query: 373 aacatgtctggtttcacatagccttaactgaagtacactgttttcccagtcttctgaatg 432
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 428 agcatgtctggtttcacatagccttaactgaagtacattgttttcccagtcttctgaatg 369
Query: 433 aagaagataaggctttaaaaggtcagatgcctcatccataataacattgctgtcctagaa 492
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 368 aagaagataaggctttaaaaggtcagatgcctcatccataataacattgctgtactagaa 309
Query: 493 tcaacccttgttctattttatatgtgctatagaacgacacaatgtgctagaataaaaatt 552
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 308 tcaacccttgttctattttatatgtgctatagaacaacacaatatgctagaataaaaatt 249
Query: 553 aatctaaaacctggaccctggcaccaagttgactgt 588
||||||||||| |||| |||||||||||||||||||
Sbjct: 248 aatctaaaacccggactctggcaccaagttgactgt 213
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_c08.g1 MSMg01no373_c08.g1 CHROMAT_FILE:
MSMg01no373_c08.g1 PHD_FILE: MSMg01no373_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:03 2005
(471 letters)
>mm_chr14_9175911_9176780
Length = 870
Score = 835 bits (432), Expect = 0.0
Identities = 459/472 (97%), Gaps = 9/472 (1%)
Strand = Plus / Plus
Query: 4 cactggagagtcccgggtgtctaacaccttaactcagtggctttccaagattggaccagg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 cactggagagtcccgggtgtctaacaccttaactcagtggctttccaagattggaccagg 263
Query: 64 ggaaatcctgctgccacccatttcctagagacagagcctgcatggaacaggttttatgaa 123
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 264 ggaaatcctgctgccacccatttcctagagacagagcctacatggaacaggttttatgaa 323
Query: 124 gatttggcatttggtggtagagggccaactgtataaaacacctccacctccaagtttacc 183
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 324 gatttggcatttggtggtagagggccaactatataaaacacctccacctccaagtttacc 383
Query: 184 gggaagattgaccacgccatgtttgcttcgagaaccttgtttgctactctcatccctcct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gggaagattgaccacgccatgtttgcttcgagaaccttgtttgctactctcatccctcct 443
Query: 244 gttttc----cctcaagactctggtccacagtgcccgtcctatactacaggaacttgcgt 299
| | |||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 444 g----caacccctcaagactctggtctacagtgcccgtcctataccacaggaacttgcgt 499
Query: 300 ttgctgttctcactctgcctctatgcccaccccacccccacttatcttttggttcttgcc 359
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 500 ttgctgttctcactctgcctctatgcccaccc-acccccacttatcttttggttcttgcc 558
Query: 360 tgattctttcctttggacccccgactgtcaggcatcacctcctgagagaagccttctttg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgattctttcctttggacccccgactgtcaggcatcacctcctgagagaagccttctttg 618
Query: 420 ggcttccatgcaaagtcacctcctgggctccctggtcaatatttcctcatag 471
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ggcttccatgcaaagtcacctcctgggctccctggtcaatatttcctcatag 670
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 870
Length adjustment: 10
Effective length of query: 461
Effective length of database: 860
Effective search space: 396460
Effective search space used: 396460
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
