Query= MSMg01no374_p20.b1 MSMg01no374_p20.b1 CHROMAT_FILE:
MSMg01no374_p20.b1 PHD_FILE: MSMg01no374_p20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:25 2005
(541 letters)
>mm_chr14_120680539_120681479
Length = 941
Score = 1023 bits (529), Expect = 0.0
Identities = 538/541 (99%)
Strand = Plus / Minus
Query: 1 acaatagacagaaaacttaaaatagcatatgtatttaagatgccactgtgactattatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acaatagacagaaaacttaaaatagcatatgtatttaagatgccactgtgactattatac 682
Query: 61 acagagtttaacagaacggcgactacacaccatctgaaatgtctaacacgattcatgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acagagtttaacagaacggcgactacacaccatctgaaatgtctaacacgattcatgttt 622
Query: 121 ctaccttgaaactgagtactttctataagttattttcatctttcttatttattcagctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctaccttgaaactgagtactttctataagttattttcatctttcttatttattcagctca 562
Query: 181 aaacctacaatgctggctacctgtaggacttgagagtcttggaggcccgagtttacgtag 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 aaacctacaatgctggctacctgtaggacttgagagtcttggaggcctgagtttacgtag 502
Query: 241 tagccaggctggctttcactgagatatggctgttaccaagtctacagagaattcttctcc 300
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 501 tagccaggctggctttcactgatatatggctgttaccaagtctacagagaattcttttcc 442
Query: 301 tctaccagcaaactgagagtgctgttgattgggtagggctctaaggaccttctaaagttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctaccagcaaactgagagtgctgttgattgggtagggctctaaggaccttctaaagttc 382
Query: 361 caattgcacaaggtatgtgtaaagcagcttacctgtaatgaatacccctaaaagagtcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caattgcacaaggtatgtgtaaagcagcttacctgtaatgaatacccctaaaagagtcat 322
Query: 421 ttccagtccccacatccatctttctaccagtttaagaggctcggtgagatgctctcaggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttccagtccccacatccatctttctaccagtttaagaggctcggtgagatgctctcaggg 262
Query: 481 gagcacaaggccattgttgttgctgtctttgttcatttggttattctctggcctgcagga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagcacaaggccattgttgttgctgtctttgttcatttggttattctctggcctgcagga 202
Query: 541 c 541
|
Sbjct: 201 c 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space: 494361
Effective search space used: 494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_p20.g1 MSMg01no374_p20.g1 CHROMAT_FILE:
MSMg01no374_p20.g1 PHD_FILE: MSMg01no374_p20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:25 2005
(255 letters)
>mm_chr14_120476317_120476972
Length = 656
Score = 462 bits (239), Expect = e-135
Identities = 251/255 (98%), Gaps = 1/255 (0%)
Strand = Plus / Plus
Query: 1 catgctgtggctacctgaaaaaaaacaaaggaagaagaaaggagaacaggattcatcaga 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 catgctgtggctacctgaaaaaaaacaaaggaagaagaaaagagaacaggattcatcaga 260
Query: 61 aaaaaaaattgcttcttcaccagagcaggggaaatagaaaactacacgggttcccccaca 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaaaaatcgcttcttcaccagagcaggggaaatagaaaactacacgggttcccccaca 320
Query: 121 cccctctccctctacagcgtcctcccctgtccctggaagggaaaaa-ggatgcctcaact 179
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 cccctctccctctacagcgtcctcccctgtccctggaagggaaaaaaggatgcctcaact 380
Query: 180 cttctcctttcctccaactgattcggcctcttgcaatgtcttctcacaagactttcagaa 239
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 cttctcctttcctccaactgattcggcctcttgccatgtcttctcacaagactttcagaa 440
Query: 240 tcaagcgattcctgg 254
|||||||||||||||
Sbjct: 441 tcaagcgattcctgg 455
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 656
Length adjustment: 9
Effective length of query: 246
Effective length of database: 647
Effective search space: 159162
Effective search space used: 159162
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
