Query= MSMg01no375_i19.b1 MSMg01no375_i19.b1 CHROMAT_FILE:
MSMg01no375_i19.b1 PHD_FILE: MSMg01no375_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:10 2005
(530 letters)
>mm_chr14_84478016_84478945
Length = 930
Score = 917 bits (474), Expect = 0.0
Identities = 507/531 (95%), Gaps = 22/531 (4%)
Strand = Plus / Plus
Query: 5 gaattccttanatcttctttacaatgttcattgataaaaactaccatttaacttatatct 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttaaatcttctttacaatgttcattgataaaaactaccatttaacttatatct 264
Query: 65 aaaacttaacttaaagcacacttatttagtatgggtcaatagagggccactatggacata 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 265 aaaacttaacttaaagcacacttatttagtatgggtcaatagagggccactatggacaca 324
Query: 125 ttagagggccctcttccttggagtactcattaggtatatgcaattctcttgttttaaatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttagagggccctcttccttggagtactcattaggtatatgcaattctcttgttttaaatt 384
Query: 185 aagttaaatttaggctttcatgtacacatgactgaagaaagatttctttttaaggttaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagttaaatttaggctttcatgtacacatgactgaagaaagatttctttttaaggttaga 444
Query: 245 gctttccctaatccaggttagagaacctagattgctctagtgcttttgttctatagattt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gctttccctaatccaggttagagaacctagattgctctagtgcttttgttctatagattt 504
Query: 305 ttttcttttcttttcttttcttttcttttcttttcttttcttttcttttcttttcttct- 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttttcttttcttttcttttcttttcttttcttttcttttcttttcttttcttttcttctc 564
Query: 364 ----tttcattttcttttcttttctcttttcttttcttttcttttctcttctcttctttt 419
|||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 565 ttcttttcattttcttttcttttctcttttcttttcttttcttttctcttct-----ttt 619
Query: 420 cttttagtatttatttatttatttatttatttatttatttattcatctatttatttattt 479
||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 620 cttttagtatttatttatttatttatttatt------------catctatttatttattt 667
Query: 480 gggtggctagaattgttttccaaaccattctttgaggcaattctttattta 530
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gggtggctagaattgttttccaaaccattctttgaggcaattctttattta 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 94
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space: 478400
Effective search space used: 478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_i19.g1 MSMg01no375_i19.g1 CHROMAT_FILE:
MSMg01no375_i19.g1 PHD_FILE: MSMg01no375_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:10 2005
(476 letters)
>mm_chr14_84638326_84639201
Length = 876
Score = 882 bits (456), Expect = 0.0
Identities = 472/478 (98%), Gaps = 3/478 (0%)
Strand = Plus / Minus
Query: 1 agcacattaaatatttggtaatactttaaggcaaatccaagtctcatttttcacacttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 agcacattaaatatttggtaatactttaaggcaaatccaagtctcatttttcacacttaa 429
Query: 61 gtaaagtaaattatggttttgagaaggtaaatttagttttcttgctttctttgatgatca 120
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 428 gtaaagtaaattatggttttgagaagatagatttagttttcttgctttctttgatgatca 369
Query: 121 tagcttggtctttgaaagaataattattggattaatgtaataactgtttaaattttaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tagcttggtctttgaaagaataattattggattaatgtaataactgtttaaattttaaaa 309
Query: 181 tattttcctaccaaaaatagtaaaataaaaaagtttaaaaattcaagtccttgtgaaggc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 308 tattttcctaccaaaaatagtaaaataaaaaagtttaaaaattcaagtccttgtgagggc 249
Query: 241 tcttaagtttttcttatttattcctcagagaacttaattttaagttgctttttaataatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tcttaagtttttcttatttattcctcagagaacttaattttaagttgctttttaataatt 189
Query: 301 ttaataaatgttgatatcaaaaactcatcctttttggtctggtggttgtgacacacattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 188 ttaataaatgttgatatcaaaaactcatcctttttggtctggtggttgtgacacaca-tt 130
Query: 361 tttttcaag--tttttttttaatgctttattggaaattttctttatttacatttcaaatg 418
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tttttcaagtttttttttttaatgctttattggaaattttctttatttacatttcaaatg 70
Query: 419 ttatatcctttcctagtttcccctctgaaaatcctctatcccctcccccttctccctg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ttatatcctttcctagtttcccctctgaaaatcctctatcccctcccccttctccctg 12
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
