Query= MSMg01no376_b23.b1 MSMg01no376_b23.b1 CHROMAT_FILE:
MSMg01no376_b23.b1 PHD_FILE: MSMg01no376_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:56 2005
(434 letters)
>mm_chr14_30170154_30170987
Length = 834
Score = 808 bits (418), Expect = 0.0
Identities = 430/434 (99%)
Strand = Plus / Minus
Query: 1 ggtattgggggaagaaaatcaagtgcataccagactactgaggtctggagagtaaattca 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 470 ggtattgggggaagaaaatcaagtgcataccagactactgaaatctggagagtaaattca 411
Query: 61 agcactgagatagccatgaagattctgattgcttatcctgggaggaggaagcagctatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 agcactgagatagccatgaagattctgattgcttatcctgggaggaggaagcagctatgc 351
Query: 121 atgctatagatggagaaaggatgaaagctggaagctcttcctgggctgggcttgtgtatt 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 350 atgctatagatggagaaaggatgagagctggaagctcttcctgggctgggcttgtgtatt 291
Query: 181 ttctaatggacaggataaggatcgttgtctatttctgatgtgttgttcatgggccatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttctaatggacaggataaggatcgttgtctatttctgatgtgttgttcatgggccatttg 231
Query: 241 ctgtactaaacatttgatagtctaggagttgaaaggatgtttgttgttggtgtgtctgat 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 230 ctgtactaaacatttgatagtctaggagttgaaaggctgtttgttgttggtgtgtctgat 171
Query: 301 atattgcaaagacaagtcagagatgtgaaagatgctctttaaatacaaagtgtagattta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 atattgcaaagacaagtcagagatgtgaaagatgctctttaaatacaaagtgtagattta 111
Query: 361 ccacaaaggtggcagccttctctccaagcatctcctagcatctgttctgataaaagctga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 ccacaaaggtggcagccttctctccaagcatctcctagcatctgttctgataaaagctga 51
Query: 421 acattcttgatata 434
||||||||||||||
Sbjct: 50 acattcttgatata 37
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_b23.g1 MSMg01no376_b23.g1 CHROMAT_FILE:
MSMg01no376_b23.g1 PHD_FILE: MSMg01no376_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:56 2005
(458 letters)
>mm_chr14_29995433_29996290
Length = 858
Score = 864 bits (447), Expect = 0.0
Identities = 456/459 (99%), Gaps = 1/459 (0%)
Strand = Plus / Plus
Query: 1 atatcaattgccttgatttggtcatttcacaatgtgtgcacatctcagaacatcatgctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 atatcaattgccttgatttggtcatttcacaatgtgtgcacatctcagaacatcatgctc 259
Query: 61 cataccacata-tagagtttgtatctgtccattaaaaattcaaaggaagagctattatga 119
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cataccacataatagagtttgtatctgtccattaaaaattcaaaggaagagctattatga 319
Query: 120 cctccatgctgaatattaaatgactaatgcaagttaaggttaattactttcactagtcct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cctccatgctgaatattaaatgactaatgcaagttaaggttaattactttcactagtcct 379
Query: 180 gtggccaaaactatgccatggcaaataccaacccacccatctcgatggcttaccacacag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtggccaaaactatgccatggcaaataccaacccacccatctcgatggcttaccacacag 439
Query: 240 tcttggcacacatctagtgtgcatcaaaggcatctgtctgctcattcagagagccaagca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcttggcacacatctagtgtgcatcaaaggcatctgtctgctcattcagagagccaagca 499
Query: 300 tggtaaggatgctgaatcccagctcagttctctatctcaatcacgaagcttcagagttca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tggtaaggatgctgaatcccagctcagttctctatctcaatcacgaagcttcagagttca 559
Query: 360 tggaagagagtgtgggatgcccatacccgctcctgaatgctttacctcatatttaacgca 419
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 560 tggaagagagtgtgggatgcccatacccgctcctgaatgctttacctcagattgaacgca 619
Query: 420 ggttgaattccttcattctacaagaacctgttttcaggg 458
|||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggttgaattccttcattctacaagaacctgttttcaggg 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
