Query= MSMg01no376_g11.b1 MSMg01no376_g11.b1 CHROMAT_FILE:
MSMg01no376_g11.b1 PHD_FILE: MSMg01no376_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:17 2005
(477 letters)
>mm_chr14_91272167_91273043
Length = 877
Score = 901 bits (466), Expect = 0.0
Identities = 472/474 (99%)
Strand = Plus / Plus
Query: 4 ggaattctttctgtttcccctaggaacagctgttgcttcctgaatattcaggccccaagt 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttctgcttcccctaggaacagctgttgcttcctgaatattcaggccccaagt 263
Query: 64 atggctaagttccatcttatataaatgatagtgcattgcattgatacatggccttcacac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atggctaagttccatcttatataaatgatagtgcattgcattgatacatggccttcacac 323
Query: 124 tggagaaagtaatcttgtttgtcttggctttctacttgcattttggaagagggattctac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tggagaaagtaatcttgtttgtcttggctttctacttgcattttggaagagggattctac 383
Query: 184 ctgagtcttggaggagttatgcttcctaacctaacctcacaatttagtatgagtattaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctgagtcttggaggagttatgcttcctaacctaacctcacaatttagtatgagtattaag 443
Query: 244 aaaaagcatcttaccatctactgtgctgtataatatggcacatgaaacaagctacagcgt 303
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 444 aaaaagcatcttaccatctactgtgctgtataagatggcacatgaaacaagctacagcgt 503
Query: 304 gctgttgggtgtataaatggcttaactcacttatgttcatttccgtttgcattgccttta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gctgttgggtgtataaatggcttaactcacttatgttcatttccgtttgcattgccttta 563
Query: 364 tgtactccatctgtaccacaactgaaatagagtgttcgtgctccacgagtatatatgtca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgtactccatctgtaccacaactgaaatagagtgttcgtgctccacgagtatatatgtca 623
Query: 424 gggcatatgcccaagtctatacttcccagtggattaacaccattactattcaga 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gggcatatgcccaagtctatacttcccagtggattaacaccattactattcaga 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_g11.g1 MSMg01no376_g11.g1 CHROMAT_FILE:
MSMg01no376_g11.g1 PHD_FILE: MSMg01no376_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:18 2005
(424 letters)
>mm_chr14_91437025_91437848
Length = 824
Score = 735 bits (380), Expect = 0.0
Identities = 386/390 (98%), Gaps = 4/390 (1%)
Strand = Plus / Minus
Query: 39 gcttctggacttagggatgtgatgttctaaacatctccacatcgcctttttctctggaat 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 gcttctggacttagggatgtgatgttctaaacatctccacatcgcctttttctctggaat 765
Query: 99 tgtaaatgtgacagaagtgtgagttatagactaaaatgaaaagcacaatcttcttcaagt 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 tgtaaatgtgacagaagtgtgagttatagactaaaatgaaaagcacaatcttcttcaagt 705
Query: 159 tgacaagactccaaataatacaaataa----atacatacatacatacatacatacataca 214
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 704 tgacaagactccaaataatacaaataaatacatacatacatacatacatacatacataca 645
Query: 215 tacatacatacatacatacaaatttgaagtttcttgtctgagtgttgtgtcaggtctgtt 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tacatacatacatacatacaaatttgaagtttcttgtctgagtgttgtgtcaggtctgtt 585
Query: 275 gtactttattctgcctctatgctgggcatgcccaggcactaccacaggcagccctccagg 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gtactttattctgcctctatgctgggcatgcccaggcactaccacaggcagccctccagg 525
Query: 335 aggaaataggacaaagtctaaaatggagtccacaggagtccccagtcttctttctgtgta 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 aggaaataggacaaagtctaaaatggagtccacaggagtccccagtcttctttctgtgta 465
Query: 395 catgggcacccttggtatacctcagagaga 424
||||||||||||||||||||||||||||||
Sbjct: 464 catgggcacccttggtatacctcagagaga 435
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 13
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
