ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTACCCCTCACCAGGATTCAGTAGTGGTGTGATGGTAGGTTTAGTTGCT
CTTGTTCATTCTCCTATACCCGAAGGATTCAGGAGGCTCCTTTGTCCCTT
CCTTTGATCTCCGTCTCAGCTCCACAAAGGCATCTCCACATAACCTCTTC
TCCCATCACCAGAATCTCCCTCTTGGGCTGTCAGTCTTGATCTTGGGAAC
AGATGGCCTCTTTGAAGGACTTTTCCCTGAGGTCCTGTAACATCAAAGAC
CCTAAGGCTTCAACCTTTCTTAGAGAGACTACAAGTTGCCTTCCAATCTG
GTGTTGTGGGAAGATGACAGAGACAACATTCAGCTTCCCTCACAACATGG
GTGTGCCATTATCACTCATCCATTCCAACAAAAGGAACGAGGCTGCATGG
TCAGCTTACAATTAGCATTAATATTAAGATGGTGAATTTTCTCCTGGGAT
TTCCCTTTGTCCTTCTTGGTGAAATAATACACATATTAACATATGACTTT
TTCTGGTTCTTGAGCTAAAGTAACAGTTTATTGCTGGAGATTTTCACTCC
GTACTTCCTACTCTGTGCAAGCTCTGAATCCAAGACACAACCCAATGACA
GAGGGAGTGACTTAAGCCCTGCAATAAAAATTATGTCAACTATGAAAATT
CTCCTTAGATTCCATTACTTACAAGGTTTCATCTGG

GCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTCCTTTACATTTGTATCCCCTTGATCT
ACGTTAGCACTTATTGCACTGGCTAAATTTACAAAACCTAAAACTATATT
AAACAGAATGGAGACAGTGGGCACCCCTGTCTCATGACTGACTTTAGTGG
AATTGCCGTAAATGTCTCTCCATTTGTAATTTAATGTTGCCTATGAGTTT
TGTGGATATTGTCTTTATTGTGTTTAGGTACATGCCACATATTCCTGATC
TCATGATTCTCATGAAGTGGGGTTGGATTTCGTCAATGGCTTTCTCACCA
TCTCAGGATGCTGATATAATGATCATAAGGTTTTTCTTTTCAGTCAGTTT
GTTTATACGGCAGATTCCATTGATGGATTTTCATATGTTGAACTGTCCTG
TTTCTTTGATCATGTGTCCCTCAACCAAAGAATGGATAAATAAAATAAGG
TTCACAGTGGAGTATTACTCCACCATTAAAAAACAACAACATGGAATTGG
CAGGCAAATAAATGAAACTAGAANAGATCATCCTGAGTGAGGTAACCAGA
CTCAGAAAGACAAACATGGTATGCACTCACTTACAGGTAGATAATAGTCA
TAACAGTGCTACAAACCACACCCCCAAAGAAGCTAAATAACATAGAGAGC
CCAAGGTGGAACGCTTGAATCTCGGATTAAGCTTCA

Query= MSMg01no376_p08.b1 MSMg01no376_p08.b1 CHROMAT_FILE:
MSMg01no376_p08.b1 PHD_FILE: MSMg01no376_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:59 2005
         (542 letters)



>mm_chr14_117263649_117264592
          Length = 944

 Score = 1006 bits (520), Expect = 0.0
 Identities = 536/542 (98%), Gaps = 4/542 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcttacccc-tcaccaggattcagtagtggtgtgatggtaggtttagttgctctt 62
           |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttaccccat-accaggattcagtagtggtgtgatggtaggtttagttgctctt 262

                                                                       
Query: 63  gttcattctcctatacccgaaggattcaggaggctcctttgtcccttcctttgatctccg 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gttcattctcctatacccgaaggattcaggaggctcctttgtcccttcctttgatctccg 322

                                                                       
Query: 123 tctcagctccacaaaggcatctccacataacctcttctcccatcaccagaatctccctct 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tctcagctccacaaaggcatctccacataacctcttctcccatcaccagaatctccctct 382

                                                                       
Query: 183 tgggctgtcagtcttgatcttgggaacagatggcctctttgaaggacttt--tccctgag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 383 tgggctgtcagtcttgatcttgggaacagatggcctctttgaaggactttcttccctgag 442

                                                                       
Query: 241 gtcctgtaacatcaaagaccctaaggcttcaacctttcttagagagactacaagttgcct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gtcctgtaacatcaaagaccctaaggcttcaacctttcttagagagactacaagttgcct 502

                                                                       
Query: 301 tccaatctggtgttgtgggaagatgacagagacaacattcagcttccctcacaacatggg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tccaatctggtgttgtgggaagatgacagagacaacattcagcttccctcacaacatggg 562

                                                                       
Query: 361 tgtgccattatcactcatccattccaacaaaaggaacgaggctgcatggtcagcttacaa 420
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 563 tgtgccattatcactcatccattccaacaaaaggaatgaggctgcatggtcagcttacaa 622

                                                                       
Query: 421 ttagcattaatattaagatggtgaattttctcctgggatttccctttgtccttcttggtg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttagcattaatattaagatggtgaattttctcctgggatttccctttgtccttcttggtg 682

                                                                       
Query: 481 aaataatacacatattaacatatgactttttctggttcttgagctaaagtaacagtttat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 683 aaataatacacatattaacatatgactttttctggttcttgagctaaagtaacggtttat 742

             
Query: 541 tg 542
           ||
Sbjct: 743 tg 744


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 944
Length adjustment: 10
Effective length of query: 532
Effective length of database: 934
Effective search space:   496888
Effective search space used:   496888
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)