Query= MSMg01no377_n18.b1 MSMg01no377_n18.b1 CHROMAT_FILE:
MSMg01no377_n18.b1 PHD_FILE: MSMg01no377_n18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:11 2005
(475 letters)
>mm_chr14_115636517_115637392
Length = 876
Score = 874 bits (452), Expect = 0.0
Identities = 467/472 (98%), Gaps = 1/472 (0%)
Strand = Plus / Minus
Query: 5 gaattcattaatttctcattatttgtttttgctttatttttgtttgtttgaatatctcct 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gaattcattaatttcttattatttgtttttgctttatttttgtttgtttgaatatctcct 617
Query: 65 tttagaggtattatttagaaatagtaaaatttccacacaattcagtaaatatatattaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tttagaggtattatttagaaatagtaaaatttccacacaattcagtaaatatatattaac 557
Query: 125 ctaacacaaaacaattttaagagcactgcaatgggcataagtagtcagcaacaaacaaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ctaacacaaaacaattttaagagcactgcaatgggcataagtagtcagcaacaaacaaat 497
Query: 185 tacagatattttattattgataactttaaagttagcacggaataaaaattgttagccaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tacagatattttattattgataactttaaagttagcacggaataaaaattgttagccaaa 437
Query: 245 gtcaagagctatataatgacttccggagatcatgctatttctgaacctcatagagtacgt 304
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 436 gtcaagagctatataatgactttcggagatcatgctatttctgaacctcatagagtacgt 377
Query: 305 ttgaaaacatcatcagaattgtaacagtggataaagtttaaaaactgtttagttatgtta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ttgaaaacatcatcagaattgtaacagtggataaagtttaaaaactgtttagttatgtta 317
Query: 365 aaagattcactaactcatacaaaggctcaacaacac-attttcagcttttggaaggtgca 423
|||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 316 aaagatccactaactcatacaaaggctcaacaacaccattttcagcttttgaaaggtgca 257
Query: 424 gaaaacaacctcctttccccagttgcaggtttgctccttggttgctactgcc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gaaaacaacctcctttccccagttgcaggtttgctccttggttgctactgcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 876
Length adjustment: 10
Effective length of query: 465
Effective length of database: 866
Effective search space: 402690
Effective search space used: 402690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_n18.g1 MSMg01no377_n18.g1 CHROMAT_FILE:
MSMg01no377_n18.g1 PHD_FILE: MSMg01no377_n18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:12 2005
(414 letters)
>mm_chr14_115457008_115457825
Length = 818
Score = 789 bits (408), Expect = 0.0
Identities = 414/418 (99%), Gaps = 4/418 (0%)
Strand = Plus / Plus
Query: 1 cccaaccttaagtttacaaatgaaaacctcaccactggggtatcagaccgctgtccatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccaaccttaagtttacaaatgaaaacctcaccactggggtatcagaccgctgtccatat 260
Query: 61 gctgcttagaggaggtgaaccagggcactgccagaatgtcactcagggaaggcagaatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgcttagaggaggtgaaccagggcactgccagaatgtcactcagggaaggcagaatgc 320
Query: 121 agtcaaggataggagtcccaatctgtgttctagacgagaaacaga----tctggaacagg 176
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 agtcaaggataggagtcccaatctgtgttctagacgagaaacagagagatctggaacagg 380
Query: 177 tgctgtggttgtcaaactctatgtacccagatgccactgggaaactcaaggagttgggaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgctgtggttgtcaaactctatgtacccagatgccactgggaaactcaaggagttgggaa 440
Query: 237 tgagggtccagggatacttgctaagccccggacagggcagaatccaacttagctctgagt 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagggtccagggatacttgctaagccccggacagggcagaatccaacttagctctgagt 500
Query: 297 gagtgccagcagtataaaggggctggcaaagaggccttctctgggagatctggcatggca 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagtgccagcagtataaaggggctggcaaagaggccttctctgggagatctggcatggca 560
Query: 357 ttttacaagggcctcctccatgacactccttgaagaagacggttcttgcttatccaaa 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttacaagggcctcctccatgacactccttgaagaagacggttcttgcttatccaaa 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 818
Length adjustment: 9
Effective length of query: 405
Effective length of database: 809
Effective search space: 327645
Effective search space used: 327645
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
