Query= MSMg01no378_h07.b1 MSMg01no378_h07.b1 CHROMAT_FILE:
MSMg01no378_h07.b1 PHD_FILE: MSMg01no378_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:57 2005
(536 letters)
>mm_chr14_31623532_31624468
Length = 937
Score = 924 bits (478), Expect = 0.0
Identities = 505/514 (98%), Gaps = 1/514 (0%)
Strand = Plus / Minus
Query: 24 ttatttatttttattcaatatgcatttgtattctgcctatgtggtatgtatctgtgatgg 83
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 921 ttatttatttttattcaatatgcatttgtattttgcctatgtggtatgtatctgtgatgg 862
Query: 84 tgttggaccccatggagctggaattacagacagctgtaaggtgctatatggactctggga 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tgttggaccccatggagctggaattacagacagctgtaaggtgctatatggactctggga 802
Query: 144 cttgaaccagggttctctggaagagtggccagtgctcttcactgctgagccatctctccg 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cttgaaccagggttctctggaagagtggccagtgctcttcactgctgagccatctctccg 742
Query: 204 accctcacagtttgagaattcttaaattctgccgtctgtacttaaatctggtatgctaca 263
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 741 accctcacagtttgagaattcttaagttctgccgtctgtacttaaatctggtatgctaca 682
Query: 264 ataaatgaaaattaatttattaaacaagacaaaggcccagctttctgttttaggtgaaag 323
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 681 ataaatgaaaattaagttattaaacaagacaaaggcccagctttctgttctaggtgaaag 622
Query: 324 tgtgcacttatgcacttcctcagtcatctgcttacgccatcaagtgactccccagggcct 383
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtgcacttacgcacttcctcagtcatctgcttacgccatcaagtgactccccagggcct 562
Query: 384 cagcatgccagggaagcgctcaccgctaagctctgctctcctgccttcaggaactttaaa 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagcatgccagggaagcgctcaccgctaagctctgctctcctgccttcaggaactttaaa 502
Query: 444 tactacttttactaactactataaaagcaccgttttcattcaatctacctttaccacccc 503
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 tactacttttactaactactataaaagcaccgttttcattcaatctacttttaccacccc 442
Query: 504 cc-atcagtaatcctcagagtctggctcgaggac 536
|| |||||| || |||||||||||||||||||||
Sbjct: 441 cccatcagtgattctcagagtctggctcgaggac 408
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 937
Length adjustment: 10
Effective length of query: 526
Effective length of database: 927
Effective search space: 487602
Effective search space used: 487602
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_h07.g1 MSMg01no378_h07.g1 CHROMAT_FILE:
MSMg01no378_h07.g1 PHD_FILE: MSMg01no378_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:57 2005
(438 letters)
>mm_chr14_31428585_31429423
Length = 839
Score = 826 bits (427), Expect = 0.0
Identities = 436/439 (99%), Gaps = 1/439 (0%)
Strand = Plus / Plus
Query: 1 caggcctacctgggctacagtaggaacctgcctcaaaaccaaaaagaattccaaacacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggcctacctgggctacagtaggaacctgcctcaaaaccaaaaagaattccaaacacag 260
Query: 61 tccctggaaataggaagtggacactgggtggcatatttgtaccttttcaacacacaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccctggaaataggaagtggacactgggtggcatatttgtaccttttcaacacacaagag 320
Query: 121 ctgagtcctaagaatcaagtgaaagctggggtctttgcacaagaaaatatgcatgctt-t 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 ctgagtcctaagaatcaagtgaaagctggggtctttgcacaagaaaatatgcatgcttat 380
Query: 180 ttttttgtacatgagtctgcatagaacagggtgggggctggggccacaaaagactgcctc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttttgtacatgagtctgcatagaacagggtgggggctggggccacaaaagactgcctc 440
Query: 240 agccccatgttactcccagatcacctagccagtgagtggtacagatgagaaggctgatgg 299
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agccccaggttactcccagatcacctagccagtgagtggtacagatgagaaggctgatgg 500
Query: 300 agcacacagcccggaggagggctaaggtactgagtaggatgaaagctgggatggggagcg 359
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 agcacacagcccggaggagggctaaggtactgagtaggatgaaagcagggatggggagcg 560
Query: 360 aaagggctgaggtagaaacagggctacaaaggtctactggctggggtgtcgggagcatct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaagggctgaggtagaaacagggctacaaaggtctactggctggggtgtcgggagcatct 620
Query: 420 ttagcctgagtgatatcac 438
|||||||||||||||||||
Sbjct: 621 ttagcctgagtgatatcac 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 839
Length adjustment: 9
Effective length of query: 429
Effective length of database: 830
Effective search space: 356070
Effective search space used: 356070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
