Query= MSMg01no378_j12.b1 MSMg01no378_j12.b1 CHROMAT_FILE:
MSMg01no378_j12.b1 PHD_FILE: MSMg01no378_j12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:07 2005
(423 letters)
>mm_chr14_22460441_22461263
Length = 823
Score = 710 bits (367), Expect = 0.0
Identities = 406/419 (96%)
Strand = Plus / Plus
Query: 5 gaattctttatttgcatcccctgggcgttggcatgtatagtgtctgttcttttattctcc 64
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttacctggatcccctgggcgttggcatgtatagtgtctgttcttttattctcc 264
Query: 65 ttcttctctctcatacgtctctttcctgaattgtgatgaggatgaaccgcgtgtgctagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 265 ttcttctctctcatacgtctctttcctgaattgtgatgaggatgaaccgcgtgtgttagt 324
Query: 125 ccatctttaaagatcctctgctgtgtatcccacaaactctcagaaccaaactatccctat 184
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 325 ccatctttaaagatcctctgctgtgtatcccacaaactctcagaaccaaaatatccctat 384
Query: 185 cagcaggcactctgtatgagtgagtgtgctagattcaggtttcgtcttgccagtgcttcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagcaggcactctgtatgagtgagtgtgctagattcaggtttcgtcttgccagtgcttcc 444
Query: 245 tgctgtccttttgggggaaatacctctctttgtgggtttatttctcaccacattcagtca 304
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 445 tgctgtccttttgggggaaatacctctcagtgtgggtttatttctcaccacattcagtca 504
Query: 305 ctgggtctcttaaatttcccaagatcgggggtattggtgggtttgtcttgattttacttc 364
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 505 ctgggtctcttaaatttcccaagatcaggggtattggtgggtttgtcttgattttagttc 564
Query: 365 ctcgcacattgtgaagtgtgcggggacctattctgtacagtccctgccttcccattggg 423
|| | ||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 565 cttggacattgtaaagtgtgcggggacctattctgtacagtacctgccttcccattggg 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_j12.g1 MSMg01no378_j12.g1 CHROMAT_FILE:
MSMg01no378_j12.g1 PHD_FILE: MSMg01no378_j12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:07 2005
(414 letters)
>mm_chr14_22634111_22634923
Length = 813
Score = 754 bits (390), Expect = 0.0
Identities = 408/414 (98%), Gaps = 1/414 (0%)
Strand = Plus / Minus
Query: 1 ttatgaggactgtatttgcttgagtaatggttccccaagacaacccctagatctgataag 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 613 ttatgaggactgtatttgcttgggtaatggttccccaagacaacccctagatctgataag 554
Query: 61 tgattttggtatttggggattgactggctagatggccttttctggaataatcaataaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tgattttggtatttggggattgactggctagatggccttttctggaataatcaataaaaa 494
Query: 121 gcacttctgtgaagctgacagtggtcactgcactagaactgacccccttgctactggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gcacttctgtgaagctgacagtggtcactgcactagaactgacccccttgctactggaag 434
Query: 181 cccaagttcatcctggagagtccctctttcttccaccgtctccagaacactgacaggtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cccaagttcatcctggagagtccctctttcttccaccgtctccagaacactgacaggtca 374
Query: 241 tggctgcgatgtctatctgtgaaattcctagcagtgggtaggggatagcacacattcacc 300
||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 373 tggctgcaatgtctatctgtgaaaatcctagcagtgggtaggg-atagcacacattcacc 315
Query: 301 ctactcactaacacccaggcaaaagggaaaactggttccaggagccctaccagctgcttc 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 314 ctactcactaacacccaggcaaaagggaaaactggttccaggaaccctaccagctgcttc 255
Query: 361 ccttttggaatagtcaaaaggatgcacctacagattcctactgcttgccaagtg 414
|||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ccttttggaatattcaaaaggatgcacctacagattcctactgcttgccaagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 813
Length adjustment: 9
Effective length of query: 405
Effective length of database: 804
Effective search space: 325620
Effective search space used: 325620
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
