Query= MSMg01no379_j10.b1 MSMg01no379_j10.b1 CHROMAT_FILE:
MSMg01no379_j10.b1 PHD_FILE: MSMg01no379_j10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:23 2005
(249 letters)
>mm_chr14_30860924_30861572
Length = 649
Score = 474 bits (245), Expect = e-138
Identities = 249/251 (99%), Gaps = 2/251 (0%)
Strand = Plus / Plus
Query: 1 ggaagttgggcgctggtgggaggtggtggaaaagggcctgtcagagcacaggtaaaggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggaagttgggcgctggtgggaggtggtggaaaagggcctgtcagagcacaggtaaaggtg 260
Query: 61 aggctgtgtctcaggagccaggcaaggagccatagcaccatttcaacctggtggccccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggctgtgtctcaggagccaggcaaggagccatagcaccatttcaacctggtggccccag 320
Query: 121 cctgatgaaaaaagtgagtcacgggtcaggaaggattggggtaggtaattttgtcctcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctgatgaaaaaagtgagtcacgggtcaggaaggattggggtaggtaattttgtcctcca 380
Query: 181 gtactggctgcaatgtgtcttatgtttaaaaaagatttatttatttatatattatatat- 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtactggctgcaatgtgtcttatgtttaaaaaagatttatttatttatatattatatata 440
Query: 240 -gagtgttttg 249
||||||||||
Sbjct: 441 tgagtgttttg 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no379_j10.g1 MSMg01no379_j10.g1 CHROMAT_FILE:
MSMg01no379_j10.g1 PHD_FILE: MSMg01no379_j10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:23 2005
(504 letters)
>mm_chr14_31026358_31027261
Length = 904
Score = 814 bits (421), Expect = 0.0
Identities = 445/453 (98%), Gaps = 2/453 (0%)
Strand = Plus / Minus
Query: 1 ccccactgtccatacggcttccaggatggcaatagtctggaactagtgcttgtgattaca 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ccccactgtccatacggctttcaggatggcaatagtctggaactagtgcttgtgattaca 393
Query: 61 agccttcagtctagagcccttcccctctgcagtcc-gacttctgtctccttgggagacat 119
||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 392 agcctccagtctggagcccttcccctctgcag-cctgacttctgtctccttgggagacat 334
Query: 120 gggaactctgctctccatctcatccactcccctctccacacaagctagagaggccagagg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gggaactctgctctccatctcatccactcccctctccacacaagctagagaggccagagg 274
Query: 180 tctgggatggcctcaggtgccgcccaggatgcacagggtcttctttctccagcctggcct 239
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tctgggatggcctcaggtgccacccaggatgcacagggtcttctttctccagcctggcct 214
Query: 240 gtctccttacctagagacaggggtctcagtgtgtatgcttggctggcctggaactcctta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gtctccttacctagagacaggggtctcagtgtgtatgcttggctggcctggaactcctta 154
Query: 300 agcagggtctggaaggcaaagctcatcctgcctcttcgtgaatgtgggagatatgcccga 359
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 153 agcagggtctggaaggcagagctcatcctgcctctttgtgaatgtgggagatatgcccga 94
Query: 360 ccacactcagcctcggtctgtcctgatatttcctatgcgtcctaaggtctcctgttctat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 ccacactcagcctcggtctgtcctgatatttcctatgcgtcctaaggtctcctgttctat 34
Query: 420 tttatttccactttcaaaaattgttggatacaa 452
|||||||||||||||||||||||||||||||||
Sbjct: 33 tttatttccactttcaaaaattgttggatacaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
