Query= MSMg01no379_m12.b1 MSMg01no379_m12.b1 CHROMAT_FILE:
MSMg01no379_m12.b1 PHD_FILE: MSMg01no379_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:38 2005
(527 letters)
>mm_chr14_78871284_78872207
Length = 924
Score = 571 bits (295), Expect = e-167
Identities = 345/363 (95%), Gaps = 6/363 (1%)
Strand = Plus / Minus
Query: 167 ctcactctgtatatcaggctggcctcgaactcagaaatccgcctgcctctgcctcccgag 226
||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 924 ctcactctgtagaccaggctggcctcgaactcagaaatctgcctgcctctgcctcccgag 865
Query: 227 tgctgggattaaaggta-g-gtccatcaccacccagcaccctacaaatcaatcttattga 284
||||||||||||||| | | | ||| |||| ||||||| |||||||||||||||||||||
Sbjct: 864 tgctgggattaaaggcatgcg-ccaccaccgcccagcatcctacaaatcaatcttattga 806
Query: 285 agcaatttctcagcagaaactttcctcttaggtggctctaggctgtgccaagatgagaat 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 agcaatttctcagcagaaactttcctcttaggtggctctaggctgtgccaagatgagaat 746
Query: 345 taaaactagccaatatacttgatcatatcaaccaagaggcaggtgttcaagtctaatcag 404
|||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 745 taaaactagccagtatacttcatcatatctaccaagaggcaggtgttcaagtctaatcag 686
Query: 405 gtcattgcgaagttcagtatctctattacacaacatgatgactagccagcaatgaaccat 464
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtcattgcgaagttcagtagctctattacacaacatgatgactagccagcaatgaaccat 626
Query: 465 ccaataaaaaaaaaaaaaccaacaacatatgggtctaatgcatatgttaattagctgact 524
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccaat---aaaaaaaaacccaacaacatatgggtctaatgcatatgttaattagctgact 569
Query: 525 tag 527
|||
Sbjct: 568 tag 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 924
Length adjustment: 10
Effective length of query: 517
Effective length of database: 914
Effective search space: 472538
Effective search space used: 472538
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_m12.g1 MSMg01no379_m12.g1 CHROMAT_FILE:
MSMg01no379_m12.g1 PHD_FILE: MSMg01no379_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:38 2005
(454 letters)
>mm_chr14_78677963_78678816
Length = 854
Score = 818 bits (423), Expect = 0.0
Identities = 447/455 (98%), Gaps = 2/455 (0%)
Strand = Plus / Plus
Query: 1 attacaaaattgtaaaaccgttgtgtaatcaccatgaatctaacaccccctatggacttt 60
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 201 attacaaaattgtaaaaccgttgtgtaatcaccatgaatctaacatcacctatggacttt 260
Query: 61 acatatacacaacctgtacaggctcaagagagaggactgtgagtttcatacaccgtgggc 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 acatatacacaacctgtacaggctcaagagagagggctgtgagtttcatacaccgtgggc 320
Query: 121 catgtctcttagtagtcttacacatgtatagacatcatccatgttttaagaagtttccaa 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 catgtctcttagtagtcttacacatgtatagacatcatccattttttaagaagtttccaa 380
Query: 181 acatctaggacatccatgctaatgctccacgaaatgagtctcagtctatgtcctgaactt 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 acatctaggacatccatgctaatgttccacgaaatgagtctcagtctatgtcctgaactt 440
Query: 241 tgatagccccaaagtacgtcgcatcttgatccggatccagcagggaagggttggacacct 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaaagccccaaagtacgtcgcatcttgatccggatccagcagggaagggttggacacct 500
Query: 301 gaatgctaatttcttcaccagctcggagcttgaaaaatcccccaacatttatggaataga 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 gaatgctaatttcttcaccagctcggagcttgaaaaatcccccaacatttatggaata-a 559
Query: 361 aa-tggaattcagaattgcccgaccagtttttcgtgctccctcctttcatcaggttatga 419
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aagtggaattcagaattgcccgaccagtttttcgtgctccctcctttcatcaggttatga 619
Query: 420 gaacttgggattttgatgctggttttaacgacata 454
|||||||||||||||||||||||||||||||||||
Sbjct: 620 gaacttgggattttgatgctggttttaacgacata 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
