Query= MSMg01no379_o17.b1 MSMg01no379_o17.b1 CHROMAT_FILE:
MSMg01no379_o17.b1 PHD_FILE: MSMg01no379_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:48 2005
(469 letters)
>mm_chr14_63647970_63648838
Length = 869
Score = 750 bits (388), Expect = 0.0
Identities = 442/466 (94%), Gaps = 12/466 (2%)
Strand = Plus / Plus
Query: 5 gaattctctccatatacagagtagcatgcattcttaacaaagggagtctgccacacagat 64
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 215 gaattctctccatagacagagtagcatgcgttcttaacaaagggagtctgccacacagat 274
Query: 65 acgtagatgtgaaataagtacacggggggccttgataatgacccaagataggaaactatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 acgtagatgtgaaataagtacacggggggccttgataatgacccaagataggaaactatg 334
Query: 125 gtaattggaaaatagtctgcgtctgagctacttgaatggaaagaaggcttttagacacaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 335 gtaattggaaaatagtctgcgtctgagctacttgaatggaaagaaggcttttaaacataa 394
Query: 185 ttgagagattcccctcacaccctggcccatgagatcacagggcatggcgacaggtggaat 244
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 395 ttgagagattcccctcacagcctggtccatgagatcacagggcatggcgacaggtggaat 454
Query: 245 taagactgaggactgcagaaatataaaaatgaagaaatatagctactttcccttccttga 304
|||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 taagtctga----------aatataaaaatgaagaaatatagctactttcccttccttga 504
Query: 305 gacaaaagctgagtagtttgaactggtgtgaaagactgcctgctaccagcccttcaggac 364
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 505 gacaaaagctgagtagtttgaactggtgtgaaagactgcctgttaccagccattcaggac 564
Query: 365 acttggctagtgctggatg-tagtcaggacatacagacactgctgagaaagctggacgtg 423
|||||||||||||||| || | |||||||| |||||||||||||||||||||||||||||
Sbjct: 565 acttggctagtgctggctgct-gtcaggacgtacagacactgctgagaaagctggacgtg 623
Query: 424 ggcgctttgggagtggtgcaggacttcagttactttgctaaggccc 469
|||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 624 ggcgctttgggagtggtgcaggactttagttactttgctaaggccc 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_o17.g1 MSMg01no379_o17.g1 CHROMAT_FILE:
MSMg01no379_o17.g1 PHD_FILE: MSMg01no379_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:48 2005
(420 letters)
>mm_chr14_63827578_63828397
Length = 820
Score = 723 bits (374), Expect = 0.0
Identities = 413/434 (95%), Gaps = 15/434 (3%)
Strand = Plus / Minus
Query: 1 ctacatatatactgttaacttttgcttccaatgttcatagcctgcagcttcaaaggagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ctacatatatactgttaacttttgcttccaatgttcatagcctgcagcttcaaaggagtt 472
Query: 61 aagaaatctatggctctaagtctggcctcatctatgcctagagaaagcatcagatttcta 120
| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aggatatctatgactctaagtctggcctcatctatgcctagagaaagcatcagatttcta 412
Query: 121 agtcttctctttcgtgtgtgtcctcaacttctccctagttcctctgtcccttgccttccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 agtcttctctttcgtgtgtgtcctcaacttctccctagttcctctgtcccttgccttccc 352
Query: 181 tgccccctgcccctctgccccaacctcaggataatccatcatcagtatcccactgggtgt 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 351 tgccccctgcccctctgccccaacctcaggataatccatcatcggtatcccactgggtgt 292
Query: 241 ttacagagcactccacagccattgttggacattttctctcttgtttgcaaaatgctttgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ttacagagcactccacagccattgttggacattttctctcttgtttgcaaaatgctttgc 232
Query: 301 agctattattacaagactatcctctcagagt-------------g-gggagatgctgacc 346
||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 231 agctattattacaagactatcctctcagagtctatctcatctcagagggagatgctgacc 172
Query: 347 cactctctagggtcaattcccattgcccccgccccccagtgggaggaccaaacctgtact 406
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 171 cactctctagggtcaattcccactg-ccccgccccccagtgggaggaccaaacctgtact 113
Query: 407 ggagaggggtggga 420
|| |||||||||||
Sbjct: 112 ggggaggggtggga 99
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
