Query= MSMg01no380_a21.b1 MSMg01no380_a21.b1 CHROMAT_FILE:
MSMg01no380_a21.b1 PHD_FILE: MSMg01no380_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:00 2005
(534 letters)
>mm_chr14_67220036_67220969
Length = 934
Score = 980 bits (507), Expect = 0.0
Identities = 528/535 (98%), Gaps = 3/535 (0%)
Strand = Plus / Minus
Query: 1 tctgttcggttccattcagttcacgcagtcagtgcagtcagagtagttcagttcgtggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 tctgttcggttccattcagttcacgcagtcagtgcagtcagagtagttcagttcgtggaa 775
Query: 61 gtgagagcaaagagaaaagcaaagcaaagcagtgcagtcagaagccaagagaagccagtt 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 774 gtgagagcaaagagaaaagcaaagcaaagcagttcagtcagaagccaagagaagccagtt 715
Query: 121 tggatcagtcaccttggagaggagttttgagccagaacagctgagttgaa-catgccagc 179
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 714 tggatcagtcaccttggagaggagttttgagccagaacagctgagttgaacca-gccagc 656
Query: 180 cagagtttagaaagaaatgagtgatcttattcagcagtaagcctctgagatgacaattac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 cagagtttagaaagaaatgagtgatcttattcagcagtaagcctctgagatgacaattac 596
Query: 240 atctgttaaggtctagataaaatgttaagacctatgtacctgctacctggctagcctgcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 atctgttaaggtctagataaaatgttaagacctatgtacctgctacctggctagcctgcc 536
Query: 300 attgtaagaaaactttctcatatgtttctgttgttacgaggacactttccaatgccaagt 359
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 535 attgtaagaaaactttctcatatgtttctgttgttacgaggacactttctaatgccaagc 476
Query: 360 tgattacatattctgtgcccctggaaaccaatcatgacacaatcagtagaactgcttttg 419
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 475 tgattacatattctgtgcccctggaaaccaatcat-acacaatcagtagaactgcttttg 417
Query: 420 tatagctaggcacaataaagttggactggaacccaccacccagcagcacttcctgcacct 479
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tatagccaggcacaataaagttggactggaacccaccacccagcagcacttcctgcacct 357
Query: 480 atgtatgaacttttatgatatctgcctttataaactgcccctgggatggacccaa 534
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 atgtatgaacttttatgatatctgcctttataaactgcccctgggatggacccaa 302
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no380_a21.g1 MSMg01no380_a21.g1 CHROMAT_FILE:
MSMg01no380_a21.g1 PHD_FILE: MSMg01no380_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:00 2005
(599 letters)
>mm_chr14_67034383_67035381
Length = 999
Score = 1007 bits (521), Expect = 0.0
Identities = 583/611 (95%), Gaps = 13/611 (2%)
Strand = Plus / Plus
Query: 1 tgtgcactgaactgccaatttcctgaccatacatcttagatttgttccaaagaaccattt 60
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 202 tgtgaactgaactgccaatttcctgaccatacatcttagatttgctccaaagaaccattt 261
Query: 61 ctaaacaggtctacttcccctgtatcctaataacctatcttttctactacctctggtggg 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 262 ctaaacaggtctacttcccctgtatcctaataacctttcttttctactacctctggtagg 321
Query: 121 tggtgggctagaagggaagttacagcatttaagaaccattatattaaatggagggtttga 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tggtgggctagaagggaggttacagcatttaagaaccattatattaaatggagggtttga 381
Query: 181 aaactttatgactaaataaggacaagaagacccagcacaggaaagcagtcagagggcagt 240
|||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aaactttatgactacat-agggcaagaagacccagcacaggaaagcagtcagagggcagt 440
Query: 241 tctaaggcaaggttgagctgaaggtctgggcaactgaggcagcaggaatctaggctttgc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 tctaaggcaaggttgagctgaaggtctgggcaactgaggcagcaggaatctaggttttgc 500
Query: 301 ttccagagggcacaggtcctggctgcccagagcctgcacaggatgaagctgcgttttaga 360
||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 ttccaaagggcacaggtcctggctgcccagagcctgcacgggatgaagctgcgttttaga 560
Query: 361 ggaggagacagtctggaagaggagcaatttgcaagaaagttttaaatcattccaatccct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggaggagacagtctggaagaggagcaatttgcaagaaagttttaaatcattccaatccct 620
Query: 421 ggttgaatggaggtgatttctccttccccatctaactttcagaagatgatcagatgttcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggttgaatggaggtgatttctccttccccatctaactttcagaagatgatcagatgttcc 680
Query: 481 ctaaggtaaggaaatgtcaactagagccaccagtgtccagcacacactaccaccactacc 540
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 681 ctaaggtaaggaaatgtcaactagagccaccagtgttcagcacacgctaccaccactacc 740
Query: 541 accaccaccaccgtgacca------------gcagcagcagcagcaacatctacaacaaa 588
|||||||||||| |||||| |||||||||||||||||||| ||||| ||
Sbjct: 741 accaccaccaccatgaccaccagcagtagcagcagcagcagcagcaacatcaacaacgaa 800
Query: 589 caaaactctat 599
|||||||||||
Sbjct: 801 caaaactctat 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
