Query= MSMg01no380_e09.b1 MSMg01no380_e09.b1 CHROMAT_FILE:
MSMg01no380_e09.b1 PHD_FILE: MSMg01no380_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:18 2005
(249 letters)
>mm_chr14_12841079_12841727
Length = 649
Score = 466 bits (241), Expect = e-136
Identities = 247/249 (99%)
Strand = Plus / Plus
Query: 1 aaagaagtcacttaagctgttgagtcaatgaccttcagttgttctgggtgtcatttccct 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 aaagaagtcacttaagctgttgagtcaatgaccttcagttgtgctgggtgtcatttccct 260
Query: 61 gtgggaatatgtagaatttctcctggaccctaaaaactatcaaaatggagagttaaatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgggaatatgtagaatttctcctggaccctaaaaactatcaaaatggagagttaaatgg 320
Query: 121 gaaaaataaagtagaagtaattgaatccataatacagataacatcaaggagcctttgaca 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 gaaaaataaagtagaagtaattgaatccatgatacagataacatcaaggagcctttgaca 380
Query: 181 gctcacgttgggttggggagttaagatggctgagagcctttgacaagatgccagggatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctcacgttgggttggggagttaagatggctgagagcctttgacaagatgccagggatat 440
Query: 241 cagaaaagg 249
|||||||||
Sbjct: 441 cagaaaagg 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no380_e09.g1 MSMg01no380_e09.g1 CHROMAT_FILE:
MSMg01no380_e09.g1 PHD_FILE: MSMg01no380_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:18 2005
(580 letters)
>mm_chr14_13008160_13009138
Length = 979
Score = 1040 bits (538), Expect = 0.0
Identities = 565/574 (98%), Gaps = 1/574 (0%)
Strand = Plus / Minus
Query: 1 tgtctcctacacaattctccatggccttatagatgtgtgagaagtggtaaaagaatcaac 60
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 573 tgtctcctacacaattctccatggccctgtagatgtgtgagaagtggtaaaagaatcaac 514
Query: 61 aatggaaggaataaatgggccagccacaaaggccttcgttcagcaatgcagaacactaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aatggaaggaataaatgggccagccacaaaggccttcgttcagcaatgcagaacactaga 454
Query: 121 taggataaacaaacattataacgtaagtgatcctggccagtcttcctttctggaaactgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 taggataaacaaacattataacgtaagtgatcctggccagtcttcctttctggaaactgt 394
Query: 181 ttcctctcttggagcaacccttgatatcctaactgccaggtaggccttctgtagaatcag 240
|||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 393 ttcctctcttggagcaacccctgatatcctaactgccaggtaggcc-tctctagaatcag 335
Query: 241 aagcacatacacgcagagaatggtagaacacacttctgccccaggttcttagggagcgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aagcacatacacgcagagaatggtagaacacacttctgccccaggttcttagggagcgca 275
Query: 301 atagaggaatgcccatctgaggctaagctgggcaacattttatatgcctattgagaaatc 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 274 atagaggaatgcccatctgaggctaagctgggcaacattttttatgcctattgagaaatc 215
Query: 361 tctaaaaagtgttttggctcagtggtaggagtacttgactagtatacaaggccctggctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tctaaaaagtgttttggctcagtggtaggagtacttgactagtatacaaggccctggctt 155
Query: 421 taatccccagcacctcacaggggaaacacgtaacatgggctttcttttattcaacaatta 480
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 caatctccagcacctcacaggggaaacacgtaacatgggctttcttttattcaacaatta 95
Query: 481 ctttcccggtggcttctactaacagtagaatgatattagtaatatgaaatttagaatccc 540
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 94 ctttcccggtggcttctactaacagtagaatgaaattagtaatatgaaatttagaatccc 35
Query: 541 ttctgccacctacttaggaaaaagcaaaagcaag 574
||||||||||||||||||||||||||||||||||
Sbjct: 34 ttctgccacctacttaggaaaaagcaaaagcaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 979
Length adjustment: 10
Effective length of query: 570
Effective length of database: 969
Effective search space: 552330
Effective search space used: 552330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
