Query= MSMg01no381_e16.b1 MSMg01no381_e16.b1 CHROMAT_FILE:
MSMg01no381_e16.b1 PHD_FILE: MSMg01no381_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:39 2005
(446 letters)
>mm_chr14_55175616_55176462
Length = 847
Score = 818 bits (423), Expect = 0.0
Identities = 438/443 (98%), Gaps = 1/443 (0%)
Strand = Plus / Plus
Query: 5 gaattcattagttgcgctctctttgagacaagagagttaatgctctctagtacagagagt 64
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattaggtgagctctctttgagacaagagagttaatgctctctagtacagagagt 264
Query: 65 gtaggtcattctagcaaccagaaatgcagcagaggtacatgactttaatcccagcactct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtaggtcattctagcaaccagaaatgcagcagaggtacatgactttaatcccagcactct 324
Query: 125 ggagacaagcaaacctctgtgatttcaagactagagtagtctacatagtgagttccagga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggagacaagcaaacctctgtgatttcaagactagagtagtctacatagtgagttccagga 384
Query: 185 cagccaaagctatgtagagagaccctgtctcaacgaaaacataagaaaatatggcaaagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagccaaagctatgtagagagaccctgtctcaacgaaaacataagaaaatatggcaaagg 444
Query: 245 attgcaaaaagaatgttcaaatcagagcacccttcgtcctgagccagagctgcaccccac 304
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 445 attgcaaaaagaatgttcaaatcagagcacccaccgtcctgagccagagctgcaccccac 504
Query: 305 caaactccttttcctcaggttactttgtaaagaaaaaaaaaaaaa-cagcctcattgggg 363
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 505 caaactccttttcctcaggttactttgtaaagaaaaaaaaaaaaaacagcctcattgggg 564
Query: 364 tgttttagcataaaatgttcaaagggttttgctgtaactgtgcattaccacaagtcagct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgttttagcataaaatgttcaaagggttttgctgtaactgtgcattaccacaagtcagct 624
Query: 424 agtgagcaccctccaaaattact 446
|||||||||||||||||||||||
Sbjct: 625 agtgagcaccctccaaaattact 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 847
Length adjustment: 10
Effective length of query: 436
Effective length of database: 837
Effective search space: 364932
Effective search space used: 364932
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_e16.g1 MSMg01no381_e16.g1 CHROMAT_FILE:
MSMg01no381_e16.g1 PHD_FILE: MSMg01no381_e16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:39 2005
(446 letters)
>mm_chr14_55350836_55351681
Length = 846
Score = 862 bits (446), Expect = 0.0
Identities = 446/446 (100%)
Strand = Plus / Minus
Query: 1 cttgggaagccagaaacatgagtgggccctggagccttgccccatttacccaggggtcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 cttgggaagccagaaacatgagtgggccctggagccttgccccatttacccaggggtcag 587
Query: 61 acccctcctttatgtcccttcctgccatctctgggtgtatgtgtatgaaagggttaccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 acccctcctttatgtcccttcctgccatctctgggtgtatgtgtatgaaagggttaccat 527
Query: 121 ttgtgtggcccacagggtttctgtgccctagaagcctggtcctatttaaaagatgagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ttgtgtggcccacagggtttctgtgccctagaagcctggtcctatttaaaagatgagtct 467
Query: 181 tggctcagttgtctcccacgccaccggatacatcccagagaaattctggtgagatgacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tggctcagttgtctcccacgccaccggatacatcccagagaaattctggtgagatgacag 407
Query: 241 agactgccatgttcccaggatccagagcagtcaagaaggagtgtgggtgtcacctgtgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 agactgccatgttcccaggatccagagcagtcaagaaggagtgtgggtgtcacctgtgat 347
Query: 301 ggcggggaacccacactcacccgtagcaacctcgtgtgcgtgttacacaggagctgtggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ggcggggaacccacactcacccgtagcaacctcgtgtgcgtgttacacaggagctgtggc 287
Query: 361 cacgtggaggccctggcagagggcgagcagtggaagagccctgacccatgagactccctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 cacgtggaggccctggcagagggcgagcagtggaagagccctgacccatgagactccctg 227
Query: 421 agatctgttggaggagaatggctggc 446
||||||||||||||||||||||||||
Sbjct: 226 agatctgttggaggagaatggctggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
