Query= MSMg01no381_f16.b1 MSMg01no381_f16.b1 CHROMAT_FILE:
MSMg01no381_f16.b1 PHD_FILE: MSMg01no381_f16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:44 2005
(462 letters)
>mm_chr14_118340771_118341633
Length = 863
Score = 861 bits (445), Expect = 0.0
Identities = 454/457 (99%), Gaps = 1/457 (0%)
Strand = Plus / Minus
Query: 7 gaatt-aatattttctcagttttctgaggcacatgaatcaggttagtatttaaacctgag 65
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gaattcaatattttatcagttttctgaggcacatgaatcaggttagtatttaaacctgag 604
Query: 66 ctctgctccctctgacatggctgtaatcatggaatggcaatctggggaggttctccgtgg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ctctgctccctctgacatggctgtaatcatggaatggcaatctggggaggttctccgtgg 544
Query: 126 ttcaaagaatgggtttctccatgtcctactgcagtcaacggggtcatagctgtggagtgg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ttcaaagaatgggtttctccatgtcctactgcagtcaacggggtcatagctgtggagtgg 484
Query: 186 cactttgaataagatcaatctagggattaattaggaaactaatgattttgtcaatgtaga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 cactttgaataagatcaatctagggattaattaggaaactaatgattttgtcaatgtaga 424
Query: 246 aaaagcttgaaagttttgagcatctagttttgctgaaaaattttctttgcctactagttc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aaaagcttgaaagttttgagcatctagttttgctgaaaaattttctttgcctactagttc 364
Query: 306 ttcccccatgcagctccttcagagagactttggagacattcaggagattgaaacagaggc 365
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttcccccgtgcagctccttcagagagactttggagacattcaggagattgaaacagaggc 304
Query: 366 ccaatttctacttctgcatgtgacagacataaaaatgattctgctaagcacacaacctcc 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ccaatttctacttctgcatgtgacagacataaaaatgattctgctaagcacacaacctcc 244
Query: 426 agaagttacttttaaaatattgaaatttcatcttcag 462
|||||||||||||||||||||||||||||||||||||
Sbjct: 243 agaagttacttttaaaatattgaaatttcatcttcag 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 863
Length adjustment: 10
Effective length of query: 452
Effective length of database: 853
Effective search space: 385556
Effective search space used: 385556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_f16.g1 MSMg01no381_f16.g1 CHROMAT_FILE:
MSMg01no381_f16.g1 PHD_FILE: MSMg01no381_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:44 2005
(457 letters)
>mm_chr14_118172689_118173548
Length = 860
Score = 851 bits (440), Expect = 0.0
Identities = 454/460 (98%), Gaps = 3/460 (0%)
Strand = Plus / Plus
Query: 1 tccaccctcccagcagccaccgctcccacttcttgcccttcttcatcccccagccagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccaccctcccagcagccaccgctcccacttcttgcccttcttcatcccccagccagttc 260
Query: 61 tcagagaaaaagatgaatatcaggaatgatgttcacttcatgtctcgttgacctagaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagagaaaaagatgaatatcaggaatgatgttcacttcatgtctcgttgacctagaaag 320
Query: 121 gagagtgtgcagcaaggcatggcgctgcgctaatgatgctgagccagaaagcaagaggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagagtgtgcagcaaggcatggcgctgcgctaatgatgctgagccagaaagcaagaggtg 380
Query: 181 aggaggaggaggaggagg---gagccgtaattgagggctgcctccatagccccgttgcct 237
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggaggaggaggaggaggagggagccgtaattgagggctgcctccatagccccgttgcct 440
Query: 238 tcgtgtctgtgtctcttctcaggatcctgggcccctgggactgctttttgaacctagacc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcgtgtctgtgtctcttctcaggatcctgggcccctgggactgctttttgaacctagacc 500
Query: 298 ataggcatggggccttctctcctattggtcccttctgtttaaggagatggatggctttgc 357
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataggcatgggaccttctctcctattggtcccttctgtttaaggagatggatggctttgc 560
Query: 358 catcataaaaatctgtctcggtggaatcagcccggtgtgctcaaagagctccttgatgcg 417
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catcatgaaaatctgtctcggtggaatcagcccggtgtgctcaaagagctccttgatgcg 620
Query: 418 agtagtcacttcttcgtacctaagtttgatttaaaagaag 457
||||||||||||||| ||||||||||||||||||||||||
Sbjct: 621 agtagtcacttcttcatacctaagtttgatttaaaagaag 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 860
Length adjustment: 10
Effective length of query: 447
Effective length of database: 850
Effective search space: 379950
Effective search space used: 379950
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
