Query= MSMg01no381_f22.b1 MSMg01no381_f22.b1 CHROMAT_FILE:
MSMg01no381_f22.b1 PHD_FILE: MSMg01no381_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:45 2005
(482 letters)
>mm_chr14_13035295_13036176
Length = 882
Score = 845 bits (437), Expect = 0.0
Identities = 470/483 (97%), Gaps = 5/483 (1%)
Strand = Plus / Minus
Query: 5 gaattccaggagagccagggctacacagaaaacaaaaacaaaaac-aaaaca----aaaa 59
||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 742 gaattccaggagaaccagggctacacagaaaacaaaaacaaaaacaaaaacaaaacaaaa 683
Query: 60 aaccctgtcttgagaaaccaaaccaaactaaccaaacaaacacacgtttctttaacattc 119
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 aaccccgtcttgagaaaccaaaccaaactaaccaaacaaacacacgtttctttaacattc 623
Query: 120 aagaccgaatacacagctcccccagggtcagatcctgccaccgctcagtccttgtgcagc 179
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 622 aagaccgaacacacagctcccccaaggtcagatcctgccaccgctcagtccttgtgcagc 563
Query: 180 atgacgtatctttccagggacttccctgttccacatcagcagcagtcactgaagtctcca 239
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 atgatgtatctttccagggacttccctgttccacatcagcagcagtcactgaagtctcca 503
Query: 240 ttcgtgacacaaaacaatggggccactagtccctcagcgcatgggctcaggtggccaaga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttcgtgacacaaaacaatggggccactagtccctcagcgcatgggctcaggtggccaaga 443
Query: 300 tttgtgttctcaatttaagatgaacaaccggtccacatttagctcagcagttaattggag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tttgtgttctcaatttaagatgaacaaccggtccacatttagctcagcagttaattggag 383
Query: 360 cagagtccacccccaaaggattgtggcaagggccgtgggcctctggcctcatctccatgt 419
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 382 cagagtccatccccaaaggattgtggcaagggccttgggcctctggcctcatctccatgt 323
Query: 420 ccagcctttaaacttctgatccctctaacccctgtgtattaaccagcactgtactttaag 479
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 322 ccagcctttaaacttctgatccctctaacccctgtgtattagccagcactgtactttaag 263
Query: 480 aag 482
|||
Sbjct: 262 aag 260
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_f22.g1 MSMg01no381_f22.g1 CHROMAT_FILE:
MSMg01no381_f22.g1 PHD_FILE: MSMg01no381_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:45 2005
(446 letters)
>mm_chr14_12859988_12860833
Length = 846
Score = 793 bits (410), Expect = 0.0
Identities = 437/446 (97%)
Strand = Plus / Plus
Query: 1 ctgggaaacacaactttgcttagtcaccaagggtccaaattcttccctgacagaggagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgggaaacacaactttgcttagtcaccaagggtccaaattcttccctgacagaggagag 260
Query: 61 atgcaaagatgtgtgcctggtccgggagttctgacagccacttatgcagaagtgtgagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 atgcaaagatgtgtgcctggtccgggagttctgacagccacttatgcaggagtgtgagaa 320
Query: 121 ggactaaagaatttatagagagaattcacaatagaccctcagttggcctgtcttctgttc 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggactaaagaagttatagagagaattcacaatagaccctcagttggcctgtcttctgttc 380
Query: 181 ttaaggcccatagacctggtgtgcacttcgggctcatctgctccaaaaagtagaactcca 240
||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 ttatggcccttagacctggtgtgcacttcgggctcatctactccaaaaagtagaactcca 440
Query: 241 ggtacaaagatgttagaagcatctttgcattgattgcagaaagcaatgaataaagatccg 300
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 ggtacaaagatgttggaagcatctttgcattaattgcagaaagcaatgaataaagatccg 500
Query: 301 ggtattgtgtgctaaacagtatggtattaaacaagccctctgggatgtttatttgaatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtattgtgtgctaaacagtatggtattaaacaagccctctgggatgtttatttgaatgt 560
Query: 361 cgcgttgctgacagaaatgctgaatatccattcctcttcacaacttagttcttctaaaac 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgcgttgctgacagagatgctgaatatccattcctcttcacaacttagttcttctaaaac 620
Query: 421 tactctttcaatgaaagctggctgag 446
|||||||||||||||||||| |||||
Sbjct: 621 tactctttcaatgaaagctgactgag 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
