Query= MSMg01no381_j04.b1 MSMg01no381_j04.b1 CHROMAT_FILE:
MSMg01no381_j04.b1 PHD_FILE: MSMg01no381_j04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:02 2005
(500 letters)
>mm_chr14_122705650_122706550
Length = 901
Score = 603 bits (312), Expect = e-177
Identities = 327/332 (98%), Gaps = 1/332 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttttatattc-aagtcaaggatctgcctttgtttgagtggagtttccagagtt 62
|||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ggaattcttttagaggcaaagtcaaggatctgcctttgtttgagtggagtttccagagtt 273
Query: 63 atagatgagtgaagttctgagttgcctgtctccttgctcctctgacacttctgtgacatc 122
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Sbjct: 272 atagatgagtgaagttctgagttgcctgtctccttgctcctctgacacttctgtgacatc 213
Query: 123 cctagtacagggtgataccagggcgtcaggcttttcctaaggtctcttcatggttctaat 182
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Sbjct: 212 cctagtacagggtgataccagggcgtcaggcttttcctaaggtctcttcatggttctaat 153
Query: 183 gtgcagctaagtattcaggcaagagtgctaggtattcccactgtgtattagctcccgtga 242
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Sbjct: 152 gtgcagctaagtattcaggcaagagtgctaggtattcccactgtgtattagctcccgtga 93
Query: 243 tacaaaaacttttgtttaacaagttccactgagccatgcctataatcccagctcttgatc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 tacaaaaacttttgtttaacaagttccactgagccatgcctataatcccagctcttgatc 33
Query: 303 agcttaggacagttcaaggccagcctaggcta 334
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Sbjct: 32 ggcttaggacagttcaaggccagcctaggcta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 901
Length adjustment: 10
Effective length of query: 490
Effective length of database: 891
Effective search space: 436590
Effective search space used: 436590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_j04.g1 MSMg01no381_j04.g1 CHROMAT_FILE:
MSMg01no381_j04.g1 PHD_FILE: MSMg01no381_j04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:02 2005
(107 letters)
>mm_chr14_122576082_122576592
Length = 511
Score = 192 bits (99), Expect = 7e-54
Identities = 105/109 (96%), Gaps = 4/109 (3%)
Strand = Plus / Plus
Query: 1 tatgaggtttacattagtactcaggagaagtatttttcactcttataagttcttctgtca 60
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Sbjct: 201 tatgaggtttacattagtactcaggagaagtatttttcactcttataagttcttctgtca 260
Query: 61 tttcatgtatatttatttatttatt----gtgtgtgagtgttggtgggg 105
||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 tttcatgtatatttatttatttatttattgtgtgtgagtgttggtgggg 309
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 107
Length of database: 511
Length adjustment: 8
Effective length of query: 99
Effective length of database: 503
Effective search space: 49797
Effective search space used: 49797
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
