Query= MSMg01no382_l17.b1 MSMg01no382_l17.b1 CHROMAT_FILE:
MSMg01no382_l17.b1 PHD_FILE: MSMg01no382_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:34 2005
(551 letters)
>mm_chr14_33607648_33608598
Length = 951
Score = 1023 bits (529), Expect = 0.0
Identities = 541/545 (99%)
Strand = Plus / Plus
Query: 7 ggaattcactttctatttcttcccagcatcttagagttcctagccaacctgccttctctc 66
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaattcactttctagttattcccagcatcttagagttcctagccaacctgccttctctc 266
Query: 67 tacctttcaggttttactaacattggttttaaagtatggtatatagagaatttagctatt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tacctttcaggttttactaacattggttttaaagtatggtatatagagaatttagctatt 326
Query: 127 tctagtgtgaggaccagtaagcaaatgtcatttccccagcttcagaatagtgtccttgga 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tctagtgtgaggaccagtaagcaaatgtcatttccccagcttcagaatagtgtccttgga 386
Query: 187 ggatgggtgatctggagtaaagctttcctgcagggagttgatgctaccaaatacctgtca 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ggatgggtgatctggagtaaagctttcctgcagggagttgatgctaccaaatacctgtca 446
Query: 247 gatagccaccctcaatcctagaggatcctggaggagaagaaatgtccccacagggtgtga 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gatagccaccctcaatcctagaggatcctggaggagaagaaatgtccccacagggtgtga 506
Query: 307 aatgactgagtggcataagcaagctgaacagatcaatcagctttctcaccagctctcaaa 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aatgactgagtggcataagcaagctgaacagatcaatcagctttctcaccagctctcaaa 566
Query: 367 ttaaactatctgtgcttcttctaatctcacatccagaccctcatttatctgtcagaactg 426
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 567 ttaaactatctgtgcttcttctaatctcacatccagactctcatttatctgtcagaactg 626
Query: 427 cttcaactgaccattttattttaaatttgagtccattagatactcgccagtggttgtcag 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 627 cttcaactgaccattttattttaaatttgagtccattagatactcgccagtggttctcag 686
Query: 487 caaggaaaactgggtttgctcacgcctatgggtctgtctagagtccaactgtgtccacgc 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 caaggaaaactgggtttgctcacgcctatgggtctgtctagagtccaactgtgtccacgc 746
Query: 547 caaga 551
|||||
Sbjct: 747 caaga 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_l17.g1 MSMg01no382_l17.g1 CHROMAT_FILE:
MSMg01no382_l17.g1 PHD_FILE: MSMg01no382_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:34 2005
(518 letters)
>mm_chr14_33793363_33794281
Length = 919
Score = 913 bits (472), Expect = 0.0
Identities = 508/520 (97%), Gaps = 3/520 (0%)
Strand = Plus / Minus
Query: 1 tccagggtctctagtatggtctgattttgattattcgagtattgagaaaggcacatgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tccagggtctctagtatggtctgattttgattattcgagtattgagaaaggcacatgtgg 660
Query: 61 taatgtctgactgccccagggaaactgtccctagactttctccatggtggtttgtaactg 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 659 taatgtctgactgccccagggaaactgtccctagactttctccatgatggtttgtaactg 600
Query: 121 agctgcagctgccccatccttgtcaaccccctgactcagcagtgaggatgaaagtttttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 agctgcagctgccccatccttgtcaaccccctgactcagcagtgaggatgaaagtttttg 540
Query: 181 cctgccggtcttcttgtgatacattcgcttacagc-aaaag-tatgggtgtcaccatgct 238
||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||
Sbjct: 539 cctgccggtcttcttgtgatacattcgcttacagcaaaaagat-tgggtgtcaccatgct 481
Query: 239 ttggggtttacttgcttaagggaaaggcctcaacggatggaaaggagaatggggactgtt 298
||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| |||||
Sbjct: 480 ttggggtttacctgcttaagggaaaggcctcaacgtatggaaagcagaatgggggctgtt 421
Query: 299 cagcttcaaacctatcccaactgatagcaggtcagctagtgcctgggcccccacatgcca 358
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cagcttcaaacccatcccaactgatagcaggtcagctagtgcctgggcccccacatgcca 361
Query: 359 cccacaacattacattctggagtaggatgcggaggtgggttgttagctgaggctcagggg 418
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 360 cccacaacattacattctggagtaggatgcggaggtgggctgttagctgaggctcagggg 301
Query: 419 atatacacccaggtttctcttgcctgttcacccttccccctctaatgggttaatgggctg 478
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 atacacacccaggtttctcttgcctgttcacccttccccctctaatgggttaatgggctg 241
Query: 479 ccctgacaatgcctctcttacttcctgttccaaccctaag 518
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 240 ccctgacaatgcctctcttacttcctgttcccaccctaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 919
Length adjustment: 10
Effective length of query: 508
Effective length of database: 909
Effective search space: 461772
Effective search space used: 461772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
